RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 ABI2Q9NYB9 513 aaPredicted RBP26.16■■□□□ 1.78
LDLRAD3-203ENST00000528989 BACE2Q9Y5Z0 518 aa26.16■■□□□ 1.78
LDLRAD3-203ENST00000528989 DUSP10Q9Y6W6 482 aa26.16■■□□□ 1.78
LDLRAD3-203ENST00000528989 PIK3R2O00459 728 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 RTN2O75298 545 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 LSM8O95777 96 aaKnown RBP26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 CCDC175P0C221 793 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 NSFP46459 744 aaKnown RBP26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 GALCP54803 685 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 KRT83P78385 493 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 PTPN14Q15678 1187 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 SLC8B1Q6J4K2 584 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 TTC9BQ8N6N2 239 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 TCF25Q9BQ70 676 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 DUSP16Q9BY84 665 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 PLXNA4Q9HCM2 1894 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 WDR27A2RRH5 827 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 VNN2O95498 520 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 RGS7P49802 495 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 MAP3K7CLP57077 242 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 GPR17Q13304 367 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 MAPRE1Q15691 268 aaKnown RBP26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 PPP2R2DQ66LE6 453 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 LLGL2Q6P1M3 1020 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 CLEC20AQ6ZU45 233 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 SPATA2LQ8IUW3 424 aaPredicted RBP26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 CPXM1Q96SM3 734 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 SMOQ99835 787 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 THAP2Q9H0W7 228 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 TRIM10Q9UDY6 481 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 CEP83Q9Y592 693 aa26.15■■□□□ 1.78
LDLRAD3-203ENST00000528989 AP1G2O75843 785 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 GABBR2O75899 941 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 CXCL14O95715 111 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 ROR1Q01973 937 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 PTPN20Q4JDL3 420 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 MMS22LQ6ZRQ5 1243 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 ZMIZ2Q8NF64 920 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 C11orf84Q9BUA3 381 aaPredicted RBP26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 CRISPLD1Q9H336 500 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 ST7Q9NRC1 585 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 SLC27A5Q9Y2P5 690 aa26.14■■□□□ 1.78
LDLRAD3-203ENST00000528989 NLRC5Q86WI3 1866 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 ATMINO43313 823 aaPredicted RBP26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 RB1P06400 928 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 FAM200BP0CF97 657 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 NPR3P17342 541 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 BCAT1P54687 386 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 BST2Q10589 180 aaKnown RBP26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 RAB30Q15771 203 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 KIAA1328Q86T90 577 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 ARNTL2Q8WYA1 636 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 C11orf70Q9BRQ4 267 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 SLC28A3Q9HAS3 691 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 LZTS1Q9Y250 596 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 HIDE1A8MVS5 230 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 TEX28O15482 410 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 IRS1P35568 1242 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 VAV2P52735 878 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 PDCLQ13371 301 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 MON1BQ7L1V2 547 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 REXO1L1PQ8IX06 675 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 MCOLN2Q8IZK6 566 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 CCAR2Q8N163 923 aaKnown RBP26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 LZTFL1Q9NQ48 299 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 ENTPD7Q9NQZ7 604 aa26.13■■□□□ 1.77
LDLRAD3-203ENST00000528989 MTMR11A4FU01 709 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 CNPP09543 421 aaKnown RBP26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 H2AFZP0C0S5 128 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 MMP8P22894 467 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 PTP4A2Q12974 167 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 NFE2Q16621 373 aaPredicted RBP26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 CYP4A22Q5TCH4 519 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 PLPP4Q5VZY2 271 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 C4orf50Q6ZRC1 276 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 H2AFVQ71UI9 128 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 ERICH1Q86X53 443 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 SMARCD1Q96GM5 515 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 PPP1R13BQ96KQ4 1090 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 OXCT2Q9BYC2 517 aaPredicted RBP26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 TLR9Q9NR96 1032 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 ADAM22Q9P0K1 906 aa26.12■■□□□ 1.77
LDLRAD3-203ENST00000528989 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 EPOPA6NHQ4 379 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 SOAT2O75908 522 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 ADCY1Q08828 1119 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 GPM6BQ13491 265 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 PIGZQ86VD9 579 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 PHF13Q86YI8 300 aaPredicted RBP26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 MICAL1Q8TDZ2 1067 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 ARHGEF26Q96DR7 871 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 STK39Q9UEW8 545 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 SALL4Q9UJQ4 1053 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 PCDHB5Q9Y5E4 795 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 SZT2Q5T011 3432 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 TRANK1O15050 2925 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 MYO7AQ13402 2215 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 H3BNC9 293 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 ERBB2P04626 1255 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 DUSP4Q13115 394 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms