RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-219	ENST00000527498	TMEM253	P0C7T8	217 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	XRCC6	P12956	609 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	TAL1	P17542	331 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ABCB4	P21439	1286 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	RPL10	P27635	214 aa	Known RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	STT3A	P46977	705 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CDK7	P50613	346 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CLCN7	P51798	805 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	MAPK10	P53779	464 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	RWDD2B	P57060	319 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ADCY2	Q08462	1091 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	MALL	Q13021	153 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	RABEP1	Q15276	862 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	GAB4	Q2WGN9	574 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	MUM1L1	Q5H9M0	696 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	EMC4	Q5J8M3	183 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	FAM209B	Q5JX69	171 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CATSPERE	Q5SY80	951 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	BTBD8	Q5XKL5	378 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	STEAP3	Q658P3	488 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	TREML4	Q6UXN2	200 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CATSPERG	Q6ZRH7	1159 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	BEND4	Q6ZU67	534 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	RFX8	Q6ZV50	586 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	GPR155	Q7Z3F1	870 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	SPRED2	Q7Z698	418 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	TTC7B	Q86TV6	843 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	TAX1BP1	Q86VP1	789 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CLEC10A	Q8IUN9	316 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	DRC7	Q8IY82	874 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	SYTL1	Q8IYJ3	562 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	COLGALT2	Q8IYK4	626 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ZNF527	Q8NB42	609 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	OR14C36	Q8NHC7	312 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	HDAC7	Q8WUI4	952 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	NUP133	Q8WUM0	1156 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	LPIN2	Q92539	896 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	IRF7	Q92985	503 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CCDC47	Q96A33	483 aa	Known RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	TMEM41A	Q96HV5	264 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	FAM167A	Q96KS9	214 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	MFSD14A	Q96MC6	490 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	UBL7	Q96S82	380 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	COLEC11	Q9BWP8	271 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CD244	Q9BZW8	370 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	UNK	Q9C0B0	810 aa	Known RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	KCTD10	Q9H3F6	313 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	UNC45A	Q9H3U1	944 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	POFUT1	Q9H488	388 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	BICC1	Q9H694	974 aa	Known RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	DNAJC18	Q9H819	358 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	UBE2Z	Q9H832	354 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	KIAA1586	Q9HCI6	787 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	RASSF1	Q9NS23	344 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	RIC8B	Q9NVN3	520 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ERVK13-1	Q9NX77	482 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ETAA1	Q9NY74	926 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	DPP7	Q9UHL4	492 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	HERC5	Q9UII4	1024 aa	Known RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	DENND2A	Q9ULE3	1009 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	MKL2	Q9ULH7	1088 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ADAMTS8	Q9UP79	889 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	PCDHGB3	Q9Y5G1	929 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ATG2A	Q2TAZ0	1938 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	TANC1	Q9C0D5	1861 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ITIH6	Q6UXX5	1313 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	COL4A6	Q14031	1691 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	RIF1	Q5UIP0	2472 aa	Known RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	CACNA1H	O95180	2353 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	BAHCC1	Q9P281	2608 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498		A0A1B0GVC2	190 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498		A0A1W2PQ27	194 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498		A0A1W2PQ64	194 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498		A0A1W2PQC6	194 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498		A0A1W2PQD8	194 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	TMEM82	A0PJX8	343 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	MYADML2	A6NDP7	307 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	ISM1	B1AKI9	464 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498		J3KRW8	73 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	HGS	O14964	777 aa	Predicted RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	KPNA5	O15131	536 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	PHGDH	O43175	533 aa	Known RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	STRN	O43815	780 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	LPXN	O60711	386 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	SKAP2	O75563	359 aa	Predicted RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	RNASEH2A	O75792	299 aa	Known RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	FGF18	O76093	207 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	PRPF6	O94906	941 aa	Known RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	ARIH2	O95376	493 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	CNOT4	O95628	575 aa	Known RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	FTL	P02792	175 aa	Predicted RBP	4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	LPL	P06858	475 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	TH	P07101	528 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	AKR1A1	P14550	325 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	KCNA5	P22460	613 aa		4.19	□□□□□ -1.74
PUM1-219	ENST00000527498	PHKA1	P46020	1223 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms