RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CCZ1P86791 482 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 SLC6A3Q01959 620 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 ROM1Q03395 351 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 SLFN5Q08AF3 891 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 DMPKQ09013 629 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 KIF5AQ12840 1032 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 XRCC4Q13426 336 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 BIRC3Q13489 604 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 GNL2Q13823 731 aaKnown RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 DDB1Q16531 1140 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 KAZNQ674X7 775 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 IQSEC1Q6DN90 963 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 TMEM53Q6P2H8 277 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 CCDC121Q6ZUS5 278 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 HDGFL2Q7Z4V5 671 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 KRT77Q7Z794 578 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 RAB11FIP4Q86YS3 637 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 LURAP1LQ8IV03 231 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 ARHGEF19Q8IW93 802 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 WDR75Q8IWA0 830 aaKnown RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 DRC7Q8IY82 874 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 CCDC13Q8IYE1 715 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 LSMEM2Q8N112 164 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 NDUFAF2Q8N183 169 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 MSANTD4Q8NCY6 345 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 SLC7A14Q8TBB6 771 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 CCDC110Q8TBZ0 833 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 SUN5Q8TC36 379 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 NSMCE1Q8WV22 266 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 IRGQQ8WZA9 623 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 LINC00476Q8WZB0 136 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 P3H4Q92791 437 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 HPS3Q969F9 1004 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 E2F7Q96AV8 911 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 TBC1D31Q96DN5 1066 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 ABHD8Q96I13 439 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 DYDC2Q96IM9 177 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 EPSTI1Q96J88 318 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 C8orf76Q96K31 380 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 COQ10AQ96MF6 247 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 FAM193BQ96PV7 902 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 NEK1Q96PY6 1258 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 MPHOSPH8Q99549 860 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 RTFDC1Q9BY42 306 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 HAPLN2Q9GZV7 340 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 C14orf93Q9H972 538 aaKnown RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 RSAD1Q9HA92 442 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 PREBQ9HCU5 417 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 VCX3AQ9NNX9 186 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 POLR3BQ9NW08 1133 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 ANO10Q9NW15 660 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 KCMF1Q9P0J7 381 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 KLHL42Q9P2K6 505 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 ANKFY1Q9P2R3 1169 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 NCDNQ9UBB6 729 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 DKK2Q9UBU2 259 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 SFMBT1Q9UHJ3 866 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 TPCN1Q9ULQ1 816 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 R3HDM2Q9Y2K5 976 aaKnown RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 COQ6Q9Y2Z9 468 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 SCINQ9Y6U3 715 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 TOP2BQ02880 1626 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 POLR3AO14802 1390 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 KDM5DQ9BY66 1539 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 UBN2Q6ZU65 1347 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 POLR2AP24928 1970 aaKnown RBP4□□□□□ -1.77
CLNS1A-209ENST00000527299 FANCD2Q9BXW9 1451 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 DAPK3O43293 454 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 MTSS1O43312 755 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 AKR1B10O60218 316 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 HIP1RO75146 1068 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 PARNO95453 639 aaKnown RBP4□□□□□ -1.77
CLNS1A-209ENST00000527299 PDHBP11177 359 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 KRT9P35527 623 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 FNTBP49356 437 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 ZNF131P52739 623 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 UBE2HP62256 183 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 PDE1BQ01064 536 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 ARID5AQ03989 594 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 ZBTB17Q13105 803 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 STIM1Q13586 685 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 ITGA7Q13683 1181 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 TUBB2AQ13885 445 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 SAFBQ15424 915 aaKnown RBP eCLIP4□□□□□ -1.77
CLNS1A-209ENST00000527299 BMP2KLQ5H9B9 411 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 CCDC174Q6PII3 467 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 C3orf62Q6ZUJ4 267 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 SPATC1Q76KD6 591 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 BMP8AQ7Z5Y6 402 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 ZNF554Q86TJ5 538 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 EXOC3L1Q86VI1 746 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 ERICH1Q86X53 443 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 CCAR1Q8IX12 1150 aaKnown RBP4□□□□□ -1.77
CLNS1A-209ENST00000527299 KIRREL3Q8IZU9 778 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 ARHGAP18Q8N392 663 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 LCORLQ8N3X6 602 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 DCLK2Q8N568 766 aa4□□□□□ -1.77
CLNS1A-209ENST00000527299 RNF10Q8N5U6 811 aaKnown RBP4□□□□□ -1.77
CLNS1A-209ENST00000527299 LILRA3Q8N6C8 439 aaPredicted RBP4□□□□□ -1.77
CLNS1A-209ENST00000527299 ZBTB38Q8NAP3 1195 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms