RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 PDXKO00764 312 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 PFKLP17858 780 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 CTHP32929 405 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 SYKP43405 635 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 GPR15P49685 360 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 CCR3P51677 355 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 TNNC1P63316 161 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 KMT5BQ4FZB7 885 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 DGKKQ5KSL6 1271 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 GPIHBP1Q8IV16 184 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 GRAMD1CQ8IYS0 662 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 SYNPOQ8N3V7 929 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 KIAA0895Q8NCT3 520 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 PARD3BQ8TEW8 1205 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 ZNF516Q92618 1163 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 CCDC47Q96A33 483 aaKnown RBP14.32□□□□□ -0.12
CAPN1-207ENST00000527189 FAM83CQ9BQN1 747 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-207ENST00000527189 SNX25Q9H3E2 840 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 COL4A3Q01955 1670 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 FANCMQ8IYD8 2048 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 COL4A2P08572 1712 aa14.32□□□□□ -0.12
CAPN1-207ENST00000527189 TICRRQ7Z2Z1 1910 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 OTOGLQ3ZCN5 2332 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 A0A1W2PQ27 194 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 A0A1W2PQ64 194 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 A0A1W2PQD8 194 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 TRIM66O15016 1216 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 PHACTR2O75167 634 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 ATP2C2O75185 946 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 PDGFRBP09619 1106 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 PPP3CCP48454 512 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 PDE6CP51160 858 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 AMPD2Q01433 879 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 ITPRIPL2Q3MIP1 535 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 SDHAF4Q5VUM1 108 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 TXNDC8Q6A555 127 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 SCN4BQ8IWT1 228 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 SPEM1Q8N4L4 309 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 USP13Q92995 863 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-207ENST00000527189 RMDN1Q96DB5 314 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 CNTNAP3BQ96NU0 1288 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 CNTNAP3Q9BZ76 1288 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 XYLT2Q9H1B5 865 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 KCTD10Q9H3F6 313 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 CRTAC1Q9NQ79 661 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 GKN1Q9NS71 199 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 GTSE1Q9NYZ3 720 aa14.31□□□□□ -0.12
CAPN1-207ENST00000527189 PATJQ8NI35 1801 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 IKBKBO14920 756 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 HCRTO43612 131 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 LILRB5O75023 590 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 C4BPAP04003 597 aaKnown RBP14.3□□□□□ -0.12
CAPN1-207ENST00000527189 RPN1P04843 607 aaKnown RBP14.3□□□□□ -0.12
CAPN1-207ENST00000527189 USP17L7P0C7H9 530 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 PTPN1P18031 435 aaKnown RBP14.3□□□□□ -0.12
CAPN1-207ENST00000527189 ANXA13P27216 316 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 GRIK1P39086 918 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 CXCL12P48061 93 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 MYL6P60660 151 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 CYP27A1Q02318 531 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 FAM160A1Q05DH4 1040 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 RUNX3Q13761 415 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 PDGFRLQ15198 375 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 CC2D1AQ6P1N0 951 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-207ENST00000527189 DENND5BQ6ZUT9 1274 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 SUMF1Q8NBK3 374 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 OR6B3Q8NGW1 331 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 RUBCNQ92622 972 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 MYLPFQ96A32 169 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 CCDC34Q96HJ3 373 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 PCED1BQ96HM7 432 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 ZFYVE19Q96K21 471 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 C8orf48Q96LL4 319 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 MRPL45Q9BRJ2 306 aaKnown RBP14.3□□□□□ -0.12
CAPN1-207ENST00000527189 TRAF3IP3Q9Y228 551 aa14.3□□□□□ -0.12
CAPN1-207ENST00000527189 DENND4CQ5VZ89 1909 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 TRAV19A0A0A6YYK7 116 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 MAPK13O15264 365 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 CALUO43852 315 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-207ENST00000527189 TADA3O75528 432 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 RHOBTB3O94955 611 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 PAPSS2O95340 614 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-207ENST00000527189 TCF3P15923 654 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 BDNFP23560 247 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 SOX9P48436 509 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 NDUFA8P51970 172 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 PSMC1P62191 440 aaKnown RBP14.29□□□□□ -0.12
CAPN1-207ENST00000527189 NOP14P78316 857 aaKnown RBP14.29□□□□□ -0.12
CAPN1-207ENST00000527189 NFIL3Q16649 462 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 KIAA1958Q8N8K9 716 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 TMC2Q8TDI7 906 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 TAF4BQ92750 862 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 EXOC4Q96A65 974 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 TTLL2Q9BWV7 592 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 ELOVL4Q9GZR5 314 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 SMG9Q9H0W8 520 aaKnown RBP14.29□□□□□ -0.12
CAPN1-207ENST00000527189 NXF1Q9UBU9 619 aaKnown RBP14.29□□□□□ -0.12
CAPN1-207ENST00000527189 CCL26Q9Y258 94 aa14.29□□□□□ -0.12
CAPN1-207ENST00000527189 FRMD4BQ9Y2L6 1034 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms