RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 TSPY1Q01534 308 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 LRRC63Q05C16 580 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 ENPEPQ07075 957 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 NFE2Q16621 373 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 CFAP221Q4G0U5 840 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 ZNF667Q5HYK9 610 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 MDH1BQ5I0G3 518 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 IQCEQ6IPM2 695 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 FOXR2Q6PJQ5 311 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 PDZD4Q76G19 769 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 IRF2BP1Q8IU81 584 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 C12orf29Q8N999 325 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 C2orf15Q8WU43 125 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 ASB16Q96NS5 453 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 KCNK16Q96T55 309 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 ARID3AQ99856 593 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 FUCA2Q9BTY2 467 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 SLC46A2Q9BY10 475 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 BCO2Q9BYV7 579 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 ZNF518BQ9C0D4 1074 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 SMG9Q9H0W8 520 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 TMEM8AQ9HCN3 771 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 ASAH2Q9NR71 780 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 GDE1Q9NZC3 331 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 DUSP12Q9UNI6 340 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 CTNND2Q9UQB3 1225 aa9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 ZFP37Q9Y6Q3 630 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-208ENST00000527025 SLC38A8A6NNN8 435 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 A8MXQ7 604 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 PSMA7O14818 248 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 SLC16A3O15427 465 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 PI15O43692 258 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 BEST1O76090 585 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 KRT13P13646 458 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 COL9A1P20849 921 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 GABRR2P28476 465 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 PCSK1P29120 753 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 PIK3CAP42336 1068 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 NDST1P52848 882 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 CYP4F8P98187 520 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 CYP27A1Q02318 531 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 SMARCB1Q12824 385 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 PLD1Q13393 1074 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 CYP4A22Q5TCH4 519 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 KRT39Q6A163 491 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 BMP8AQ7Z5Y6 402 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 FILIP1Q7Z7B0 1213 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 ACOT1Q86TX2 421 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 SPATA2LQ8IUW3 424 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 SCN4BQ8IWT1 228 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 UBALD2Q8IYN6 164 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 FUKQ8N0W3 1084 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 MLKLQ8NB16 471 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 LMO3Q8TAP4 145 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 RIN3Q8TB24 985 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 ZSCAN18Q8TBC5 510 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 PBXIP1Q96AQ6 731 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 MYRFLQ96LU7 910 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 SLC22A12Q96S37 553 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 ELOVL4Q9GZR5 314 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 SNX25Q9H3E2 840 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 ABCB6Q9NP58 842 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 RTN4Q9NQC3 1192 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 MAGEC2Q9UBF1 373 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 COQ4Q9Y3A0 265 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 R3HCC1Q9Y3T6 440 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 ASB3Q9Y575 518 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 ZDBF2Q9HCK1 2354 aa9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 NUP210Q8TEM1 1887 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-208ENST00000527025 F8VP50 259 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 ZNF197O14709 1029 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 ECI2O75521 394 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 NOL4O94818 638 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 PRAMEF12O95522 483 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 EPB41P11171 864 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 SRFP11831 508 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 CCDC130P13994 396 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 GTF2H1P32780 548 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 MAGEA11P43364 429 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 PGFP49763 221 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 NOP14P78316 857 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 INCA1Q0VD86 236 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 PAK1Q13153 545 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 GRM2Q14416 872 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 SKOR2Q2VWA4 1001 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 DCAF17Q5H9S7 520 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 CWF19L1Q69YN2 538 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 TXNDC8Q6A555 127 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 VITQ6UXI7 678 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 C11orf57Q6ZUT1 292 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 FRMD5Q7Z6J6 570 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 CRYBG2Q8N1P7 616 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 ELMOD1Q8N336 334 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 B3GALNT2Q8NCR0 500 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 ZMIZ2Q8NF64 920 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 TAF4BQ92750 862 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 SMARCD2Q92925 531 aa9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 FUBP3Q96I24 572 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCDC90B-208ENST00000527025 CYP2S1Q96SQ9 504 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms