RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 DNAJC12Q9UKB3 198 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 KIAA1257Q9ULG3 409 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 SIK3Q9Y2K2 1263 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 NOTCH4Q99466 2003 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 TTC28Q96AY4 2481 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 CLUHO75153 1309 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 TRIM66O15016 1216 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 NOL4O94818 638 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 SERPINC1P01008 464 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 RHOP08100 348 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 PAEPP09466 180 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 KLK7P49862 253 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 ZNF132P52740 706 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 CACNA2D1P54289 1103 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 EPHA5P54756 1037 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 NTHL1P78549 312 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 FANCCQ00597 558 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 VEPH1Q14D04 833 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 SYCP1Q15431 976 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 FILIP1LQ4L180 1135 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 PABPC1LQ4VXU2 614 aaKnown RBP13.72□□□□□ -0.21
SMPD1-202ENST00000526280 PPP1R26Q5T8A7 1209 aaPredicted RBP13.72□□□□□ -0.21
SMPD1-202ENST00000526280 SDHAF4Q5VUM1 108 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 ARHGAP17Q68EM7 881 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 ITIH5Q86UX2 942 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
SMPD1-202ENST00000526280 GPR152Q8TDT2 470 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 SMARCD1Q96GM5 515 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 SPATA17Q96L03 361 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 C8orf48Q96LL4 319 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 CEP295NLQ96MC4 621 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 PHF7Q9BWX1 381 aaPredicted RBP13.72□□□□□ -0.21
SMPD1-202ENST00000526280 NAA15Q9BXJ9 866 aaKnown RBP13.72□□□□□ -0.21
SMPD1-202ENST00000526280 LRRC3Q9BY71 257 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 TMEM30AQ9NV96 361 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 PRKAG3Q9UGI9 489 aa13.72□□□□□ -0.21
SMPD1-202ENST00000526280 AJAP1Q9UKB5 411 aaPredicted RBP13.72□□□□□ -0.21
SMPD1-202ENST00000526280 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
SMPD1-202ENST00000526280 A0A1B0GTH6 734 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 F8VP50 259 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 TEX33O43247 280 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 AP1G2O75843 785 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 VDRP11473 427 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 KRT5P13647 590 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 UCHL3P15374 230 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 HMGA1P17096 107 aaKnown RBP13.71□□□□□ -0.21
SMPD1-202ENST00000526280 RFX1P22670 979 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 ADORA2BP29275 332 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 NR1I3Q14994 352 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 TMC8Q8IU68 726 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 HS6ST3Q8IZP7 471 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 LEMD2Q8NC56 503 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 SHC3Q92529 594 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 SMOQ99835 787 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 GANQ9H2C0 597 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 CSNK1G1Q9HCP0 422 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 ASAH2Q9NR71 780 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 KRT82Q9NSB4 513 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 FHOD1Q9Y613 1164 aa13.71□□□□□ -0.21
SMPD1-202ENST00000526280 SLC38A8A6NNN8 435 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 FOXN3O00409 490 aaPredicted RBP13.7□□□□□ -0.22
SMPD1-202ENST00000526280 ZNF197O14709 1029 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 BEST1O76090 585 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 FAM200BP0CF97 657 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 CSH1P0DML2 217 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 CSH2P0DML3 217 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 CD19P15391 556 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 FSHRP23945 695 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 ANXA13P27216 316 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 MTMR3Q13615 1198 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 SLC5A9Q2M3M2 681 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 SGO2Q562F6 1265 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 PRSS36Q5K4E3 855 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 CYP4A22Q5TCH4 519 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 PDZD4Q76G19 769 aaPredicted RBP13.7□□□□□ -0.22
SMPD1-202ENST00000526280 ADHFE1Q8IWW8 467 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 RNF214Q8ND24 703 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 ZMIZ2Q8NF64 920 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 ITFG1Q8TB96 612 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 TFAP2BQ92481 460 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 KCNK16Q96T55 309 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 DUSP16Q9BY84 665 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 STK33Q9BYT3 514 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 GPR88Q9GZN0 384 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 ZNF334Q9HCZ1 680 aaPredicted RBP13.7□□□□□ -0.22
SMPD1-202ENST00000526280 DMAP1Q9NPF5 467 aaPredicted RBP13.7□□□□□ -0.22
SMPD1-202ENST00000526280 FAM207AQ9NSI2 230 aaPredicted RBP13.7□□□□□ -0.22
SMPD1-202ENST00000526280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMPD1-202ENST00000526280 USTQ9Y2C2 406 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 DAAM1Q9Y4D1 1078 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 DENND4AQ7Z401 1863 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 VCANP13611 3396 aa13.7□□□□□ -0.22
SMPD1-202ENST00000526280 O00370 1275 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 EPHB6O15197 1021 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 MICAL2O94851 1124 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 MYL4P12829 197 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 NPR3P17342 541 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 USP8P40818 1118 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 CCR2P41597 374 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms