RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 HEBP1Q9NRV9 189 aa19.66■□□□□ 0.74
TSPAN4-216ENST00000526055 USP34Q70CQ2 3546 aa19.66■□□□□ 0.74
TSPAN4-216ENST00000526055 NUP210Q8TEM1 1887 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 H0Y858 1186 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 STX10O60499 249 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 KINO60870 393 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 PFKLP17858 780 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 GRIK1P39086 918 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 PIK3CAP42336 1068 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 PRCPP42785 496 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 PPP3CCP48454 512 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 ZNF268Q14587 947 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 SDHAF4Q5VUM1 108 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 ALYREFQ86V81 257 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 UNC93AQ86WB7 457 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 SMYD4Q8IYR2 804 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 BPIFB1Q8TDL5 484 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 CSGALNACT1Q8TDX6 532 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 RSPRY1Q96DX4 576 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 FAXDC2Q96IV6 333 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 BCO2Q9BYV7 579 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 SMYD3Q9H7B4 428 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 C8orf33Q9H7E9 229 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 THG1LQ9NWX6 298 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 NME7Q9Y5B8 376 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 NCANO14594 1321 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 ATP8B3O60423 1300 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 F5P12259 2224 aa19.65■□□□□ 0.74
TSPAN4-216ENST00000526055 FAM170BA6NMN3 283 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 CLSTN1O94985 981 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 HLA-DRAP01903 254 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 DCNP07585 359 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 EPB41P11171 864 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 TRIM21P19474 475 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 RPS9P46781 194 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 PDE6CP51160 858 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 NOP14P78316 857 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 FKBP3Q00688 224 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 LRRC63Q05C16 580 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 STIM1Q13586 685 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 UBXN2BQ14CS0 331 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 ANGPT1Q15389 498 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 DENND5BQ6ZUT9 1274 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 ZC3H3Q8IXZ2 948 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 CLDN23Q96B33 292 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 TTLL2Q9BWV7 592 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 TMEM8AQ9HCN3 771 aa19.64■□□□□ 0.73
TSPAN4-216ENST00000526055 SLC16A3O15427 465 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 PRAMEF12O95522 483 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 ANP32AP39687 249 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 MRE11P49959 708 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 CDH8P55286 799 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 PPP3CAQ08209 521 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 KRT39Q6A163 491 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 ADSSL1Q8N142 457 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 MAB21L3Q8N8X9 362 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 CCDC150Q8NCX0 1101 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 IER2Q9BTL4 223 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 DPEP3Q9H4B8 488 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 CYP3A43Q9HB55 503 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 TDP1Q9NUW8 608 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 PIAS3Q9Y6X2 628 aa19.63■□□□□ 0.73
TSPAN4-216ENST00000526055 VPS13AQ96RL7 3174 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 PROB1E7EW31 1015 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 PSMA7O14818 248 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 TADA3O75528 432 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 TRIM49P0CI25 452 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 TRIM49CP0CI26 452 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 TARSP26639 723 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 NBL1P41271 181 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 ASPAP45381 313 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 GCLMP48507 274 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 TXNDC8Q6A555 127 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 FOXR2Q6PJQ5 311 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 SCARA5Q6ZMJ2 495 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 C1orf210Q8IVY1 113 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 CRYBG2Q8N1P7 616 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 FAM3CQ92520 227 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 DHTKD1Q96HY7 919 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 LRRC3BQ96PB8 259 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 B3GNT5Q9BYG0 378 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 DNAI2Q9GZS0 605 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 FAM124BQ9H5Z6 455 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 CHMP5Q9NZZ3 219 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 PTPRDP23468 1912 aa19.62■□□□□ 0.73
TSPAN4-216ENST00000526055 DENND4CQ5VZ89 1909 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 TRAV19A0A0A6YYK7 116 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 SHISA7A6NL88 538 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 F8VP50 259 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 USP17L7P0C7H9 530 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 INCA1Q0VD86 236 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 TTC39CQ8N584 583 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 STKLD1Q8NE28 680 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 TAS1R2Q8TE23 839 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 USP13Q92995 863 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 ZNF518BQ9C0D4 1074 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 NIF3L1Q9GZT8 377 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 SDCBP2Q9H190 292 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 TRPM5Q9NZQ8 1165 aa19.61■□□□□ 0.73
TSPAN4-216ENST00000526055 MTF2Q9Y483 593 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms