RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
SSBP3-210ENST00000525990 NCAM2O15394 837 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 WEE1P30291 646 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 AVPR1AP37288 418 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 MAGEA9P43362 315 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 SYKP43405 635 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
SSBP3-210ENST00000525990 ZNF528Q3MIS6 628 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 PKN3Q6P5Z2 889 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 MON1AQ86VX9 555 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 CELF5Q8N6W0 485 aaKnown RBP12.88□□□□□ -0.35
SSBP3-210ENST00000525990 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 OR6B3Q8NGW1 331 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 PARD3BQ8TEW8 1205 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 MRPS31Q92665 395 aaKnown RBP12.88□□□□□ -0.35
SSBP3-210ENST00000525990 NELL1Q92832 810 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 TRMT2BQ96GJ1 504 aaKnown RBP12.88□□□□□ -0.35
SSBP3-210ENST00000525990 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.35
SSBP3-210ENST00000525990 MYRFLQ96LU7 910 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 FAM83CQ9BQN1 747 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 ZNF518BQ9C0D4 1074 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.357e-7■■■■■ 130
SSBP3-210ENST00000525990 TDP1Q9NUW8 608 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 DMAC2Q9NW81 257 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 MAGEC2Q9UBF1 373 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-210ENST00000525990 MAPK8IP1Q9UQF2 711 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 OTOGLQ3ZCN5 2332 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 RALGAPA1Q6GYQ0 2036 aa12.88□□□□□ -0.35
SSBP3-210ENST00000525990 PTPRZ1P23471 2315 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 F8VP50 259 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 PHACTR2O75167 634 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 C4BPAP04003 597 aaKnown RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 NR3C1P04150 777 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 GNL1P36915 607 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 GRIK1P39086 918 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 MAGEA11P43364 429 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 TNNC1P63316 161 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 ZXDBP98169 803 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 DPYDQ12882 1025 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 ORC1Q13415 861 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 BIRC3Q13489 604 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 ZC3H14Q6PJT7 736 aaKnown RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 RALGPS2Q86X27 583 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 KIAA2013Q8IYS2 634 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 ARL14EPQ8N8R7 260 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 MYCBPAPQ8TBZ2 947 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 B3GNT5Q9BYG0 378 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 C8orf33Q9H7E9 229 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 POLR3BQ9NW08 1133 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-210ENST00000525990 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 WNT6Q9Y6F9 365 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 GVINP1Q7Z2Y8 2422 aa12.87□□□□□ -0.35
SSBP3-210ENST00000525990 FAM237AA0A1B0GTK4 181 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 A8MXQ7 604 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 SCAMP3O14828 347 aaKnown RBP12.86□□□□□ -0.35
SSBP3-210ENST00000525990 LILRB5O75023 590 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 TACC1O75410 805 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 CLSTN1O94985 981 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 PTPN1P18031 435 aaKnown RBP12.86□□□□□ -0.35
SSBP3-210ENST00000525990 CLDN10P78369 228 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 IFRD2Q12894 506 aaPredicted RBP12.86□□□□□ -0.35
SSBP3-210ENST00000525990 SRSF5Q13243 272 aaKnown RBP12.86□□□□□ -0.35
SSBP3-210ENST00000525990 TRPC3Q13507 836 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 CCINQ13939 588 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 ZNF77Q15935 545 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 LPAL2Q16609 132 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 ITPRIPL2Q3MIP1 535 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 SPOPLQ6IQ16 392 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 KRBA2Q6ZNG9 492 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 C4orf50Q6ZRC1 276 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 B3GALNT2Q8NCR0 500 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 HINFPQ9BQA5 517 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 FBRSL1Q9HCM7 1045 aaKnown RBP12.86□□□□□ -0.35
SSBP3-210ENST00000525990 ZSCAN32Q9NX65 697 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 CGNQ9P2M7 1197 aaKnown RBP12.86□□□□□ -0.35
SSBP3-210ENST00000525990 UXTQ9UBK9 157 aaPredicted RBP12.86□□□□□ -0.35
SSBP3-210ENST00000525990 HMGXB4Q9UGU5 601 aa12.86□□□□□ -0.35
SSBP3-210ENST00000525990 ANTXRLA6NF34 631 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 PDXKO00764 312 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 STAU1O95793 577 aaKnown RBP12.85□□□□□ -0.35
SSBP3-210ENST00000525990 CKMP06732 381 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 TRIM49P0CI25 452 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 TRIM49CP0CI26 452 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 DDX6P26196 483 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■■□□□ 12.6
SSBP3-210ENST00000525990 MLLT6P55198 1093 aaPredicted RBP12.85□□□□□ -0.35
SSBP3-210ENST00000525990 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 USP4Q13107 963 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 PSMD2Q13200 908 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 RUNX3Q13761 415 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 NCOA4Q13772 614 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 MTF1Q14872 753 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 FSTL4Q6MZW2 842 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 VSTM1Q6UX27 236 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms