RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 KCNB1Q14721 858 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 CRY1Q16526 586 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 SLFN12LQ6IEE8 588 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 SLC39A4Q6P5W5 647 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 ARMCX6Q7L4S7 300 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 RASSF3Q86WH2 238 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 GPBP1Q86WP2 473 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 SYT12Q8IV01 421 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 SCN4BQ8IWT1 228 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 TMEFF1Q8IYR6 380 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 HDDC3Q8N4P3 179 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 ARL14EPQ8N8R7 260 aaPredicted RBP8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 MDGA1Q8NFP4 955 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 TRMT2BQ96GJ1 504 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 MYRFLQ96LU7 910 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 ZNF560Q96MR9 790 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 SLC22A12Q96S37 553 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 ACBD6Q9BR61 282 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 REEP2Q9BRK0 252 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 CCSER1Q9C0I3 900 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 DDX43Q9NXZ2 648 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 BCCIPQ9P287 314 aaKnown RBP eCLIP8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 KLK13Q9UKR3 277 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 AGO2Q9UKV8 859 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 MMP17Q9ULZ9 603 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 ITPR1Q14643 2758 aa8.53□□□□□ -1.04
NSMCE2-213ENST00000523824 EML5Q05BV3 1969 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 SPAARA0A1B0GVQ0 90 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 C2orf78A6NCI8 922 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 H0Y626 953 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 HUS1O60921 280 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 TRIM16O95361 564 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 CHRM1P11229 460 aaPredicted RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 ACAT1P24752 427 aaKnown RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 OPRD1P41143 372 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 PNPLA4P41247 253 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 DPP6P42658 865 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 PTGER3P43115 390 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 PDE6CP51160 858 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 GTF2BQ00403 316 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 POU5F1Q01860 360 aaKnown RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 TMEM119Q4V9L6 283 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 ZC2HC1CQ53FD0 456 aaPredicted RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 LMBRD2Q68DH5 695 aaPredicted RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 MCTP1Q6DN14 999 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 TMEM92Q6UXU6 159 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 NT5DC4Q86YG4 428 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 SPATA2LQ8IUW3 424 aaPredicted RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 TMEM86AQ8N2M4 240 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 PGBD3Q8N328 593 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 PDCL2Q8N4E4 241 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 OLIG1Q8TAK6 271 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 WHAMMQ8TF30 809 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 LRRC15Q8TF66 581 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 LEO1Q8WVC0 666 aaPredicted RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 RLN3Q8WXF3 142 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 CALML4Q96GE6 196 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 ZSCAN31Q96LW9 406 aaPredicted RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 GTPBP2Q9BX10 602 aaKnown RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 ABCB6Q9NP58 842 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 POLMQ9NP87 494 aaPredicted RBP8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 TMEM74BQ9NUR3 256 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 GCNT4Q9P109 453 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 GTF3C4Q9UKN8 822 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 ARHGAP26Q9UNA1 814 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 AGAP1Q9UPQ3 857 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 NBEAQ8NFP9 2946 aa8.52□□□□□ -1.05
NSMCE2-213ENST00000523824 ANTXRLA6NF34 631 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 TISP43B9A030 160 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 LEFTY2O00292 366 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 EIF5BO60841 1220 aaKnown RBP8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 TBCAO75347 108 aaKnown RBP8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 IL18RAPO95256 599 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 KLF8O95600 359 aaPredicted RBP8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 APODP05090 189 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 ITGB3P05106 788 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 CFIP05156 583 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 TCF3P15923 654 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 POLR2BP30876 1174 aaKnown RBP8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 UBA7P41226 1012 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 P2RY2P41231 377 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 ZNF131P52739 623 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 ATP2C1P98194 919 aaPredicted RBP8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 TFAMQ00059 246 aaKnown RBP8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 GFPT1Q06210 699 aaPredicted RBP8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 SEMA3BQ13214 749 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 POSTNQ15063 836 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 RILPL1Q5EBL4 403 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 INTS6LQ5JSJ4 861 aaKnown RBP8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 SPDYCQ5MJ68 293 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 EOGTQ5NDL2 527 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 LYSMD4Q5XG99 296 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 SLC23A3Q6PIS1 610 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 PIP4P1Q86T03 277 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 CHCHD4Q8N4Q1 142 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 ALLCQ8N6M5 410 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 FRMD1Q8N878 549 aa8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 TXNDC5Q8NBS9 432 aaKnown RBP8.51□□□□□ -1.05
NSMCE2-213ENST00000523824 CEP76Q8TAP6 659 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms