RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 FAM171BQ6P995 826 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 FOXR2Q6PJQ5 311 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 PARM1Q6UWI2 310 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 SPATA2LQ8IUW3 424 aaPredicted RBP10.9□□□□□ -0.66
TRIM35-204ENST00000521283 TTC39CQ8N584 583 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 FGF14Q92915 247 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 IRF7Q92985 503 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 MCRS1Q96EZ8 462 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 TRMT2BQ96GJ1 504 aaKnown RBP10.9□□□□□ -0.66
TRIM35-204ENST00000521283 MSANTD3Q96H12 275 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 ASB16Q96NS5 453 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 OSBPL6Q9BZF3 934 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 ABI2Q9NYB9 513 aaPredicted RBP10.9□□□□□ -0.66
TRIM35-204ENST00000521283 CHMP5Q9NZZ3 219 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 MAGEC2Q9UBF1 373 aaPredicted RBP10.9□□□□□ -0.66
TRIM35-204ENST00000521283 MRPS17Q9Y2R5 130 aaKnown RBP10.9□□□□□ -0.66
TRIM35-204ENST00000521283 ATP8B3O60423 1300 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 PTPRJQ12913 1337 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 TTC24A2A3L6 582 aaPredicted RBP10.89□□□□□ -0.67
TRIM35-204ENST00000521283 NCAM2O15394 837 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 VNN2O95498 520 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 CST3P01034 146 aaPredicted RBP10.89□□□□□ -0.67
TRIM35-204ENST00000521283 C4BPAP04003 597 aaKnown RBP10.89□□□□□ -0.67
TRIM35-204ENST00000521283 PSMC3P17980 439 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 AOC1P19801 751 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 PLA2G5P39877 138 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 VAMP7P51809 220 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 STARD6P59095 220 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 FKBP3Q00688 224 aaKnown RBP10.89□□□□□ -0.67
TRIM35-204ENST00000521283 LRRC63Q05C16 580 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 NCOA4Q13772 614 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 ZNF699Q32M78 642 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 ZACNQ401N2 412 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 CEP135Q66GS9 1140 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 LMBRD2Q68DH5 695 aaPredicted RBP10.89□□□□□ -0.67
TRIM35-204ENST00000521283 LRRTM3Q86VH5 581 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 TMC8Q8IU68 726 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 FAM186BQ8IYM0 893 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 SIX5Q8N196 739 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 SNIP1Q8TAD8 396 aaKnown RBP10.89□□□□□ -0.67
TRIM35-204ENST00000521283 FEZF2Q8TBJ5 459 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 MYCBPAPQ8TBZ2 947 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 RSAD2Q8WXG1 361 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 TNIP3Q96KP6 325 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 SPATA17Q96L03 361 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 TRMT61BQ9BVS5 477 aaKnown RBP10.89□□□□□ -0.67
TRIM35-204ENST00000521283 LRRC3Q9BY71 257 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 ATXN3LQ9H3M9 355 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 SLITRK6Q9H5Y7 841 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 ARHGEF3Q9NR81 526 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 DENND4CQ5VZ89 1909 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 MUC6Q6W4X9 2439 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 KMT2EQ8IZD2 1858 aa10.89□□□□□ -0.67
TRIM35-204ENST00000521283 NUP210Q8TEM1 1887 aaPredicted RBP10.89□□□□□ -0.67
TRIM35-204ENST00000521283 LRRIQ3A6PVS8 624 aaPredicted RBP10.88□□□□□ -0.67
TRIM35-204ENST00000521283 J3QL48 77 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 MAN2B1O00754 1011 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 PSMA7O14818 248 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 EPB41P11171 864 aaKnown RBP10.88□□□□□ -0.67
TRIM35-204ENST00000521283 CEBPBP17676 345 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 ANXA13P27216 316 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 GABRR2P28476 465 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 GPC5P78333 572 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 ZCWPW2Q504Y3 356 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 FAM78AQ5JUQ0 283 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 SV2AQ7L0J3 742 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 UNC93AQ86WB7 457 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 MFSD6LQ8IWD5 586 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 YAF2Q8IY57 180 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 OR6B3Q8NGW1 331 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 SHKBP1Q8TBC3 707 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 ZSCAN18Q8TBC5 510 aaPredicted RBP10.88□□□□□ -0.67
TRIM35-204ENST00000521283 GPR152Q8TDT2 470 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 ING5Q8WYH8 240 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 MRPS31Q92665 395 aaKnown RBP10.88□□□□□ -0.67
TRIM35-204ENST00000521283 DHTKD1Q96HY7 919 aaPredicted RBP10.88□□□□□ -0.67
TRIM35-204ENST00000521283 MYRFLQ96LU7 910 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 TMEM209Q96SK2 561 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 PKMYT1Q99640 499 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 SYT15Q9BQS2 421 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 ELOVL4Q9GZR5 314 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 DNAJC25Q9H1X3 360 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 CRISPLD1Q9H336 500 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 TASP1Q9H6P5 420 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 KIF9Q9HAQ2 790 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 THG1LQ9NWX6 298 aaKnown RBP10.88□□□□□ -0.67
TRIM35-204ENST00000521283 GTF3C4Q9UKN8 822 aa10.88□□□□□ -0.67
TRIM35-204ENST00000521283 ZNF638Q14966 1978 aaKnown RBP10.87□□□□□ -0.67
TRIM35-204ENST00000521283 A0A1W2PRU2 124 aa10.87□□□□□ -0.67
TRIM35-204ENST00000521283 A8MXQ7 604 aa10.87□□□□□ -0.67
TRIM35-204ENST00000521283 CHADO15335 359 aa10.87□□□□□ -0.67
TRIM35-204ENST00000521283 SLC16A3O15427 465 aaKnown RBP10.87□□□□□ -0.67
TRIM35-204ENST00000521283 NOL4O94818 638 aa10.87□□□□□ -0.67
TRIM35-204ENST00000521283 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
TRIM35-204ENST00000521283 ATF6P18850 670 aa10.87□□□□□ -0.67
TRIM35-204ENST00000521283 CCR2P41597 374 aa10.87□□□□□ -0.67
TRIM35-204ENST00000521283 SMCPP49901 116 aaPredicted RBP10.87□□□□□ -0.67
TRIM35-204ENST00000521283 MYL6P60660 151 aa10.87□□□□□ -0.67
TRIM35-204ENST00000521283 UBE2HP62256 183 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms