RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 KRT5P13647 590 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 HMGA1P17096 107 aaKnown RBP13.15□□□□□ -0.31
CLK4-208ENST00000520957 USP8P40818 1118 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 EPHB3P54753 998 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 FANCCQ00597 558 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 AAK1Q2M2I8 961 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 FKBP15Q5T1M5 1219 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 RBBP8NLQ8NC74 664 aaPredicted RBP13.15□□□□□ -0.31
CLK4-208ENST00000520957 ZMIZ2Q8NF64 920 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 RPGRIP1Q96KN7 1286 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 HNRNPABQ99729 332 aaKnown RBP13.15□□□□□ -0.31
CLK4-208ENST00000520957 SMOQ99835 787 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 NAA15Q9BXJ9 866 aaKnown RBP13.15□□□□□ -0.31
CLK4-208ENST00000520957 GPR88Q9GZN0 384 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 GANQ9H2C0 597 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 HSFX1Q9UBD0 423 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 CNTN6Q9UQ52 1028 aa13.15□□□□□ -0.31
CLK4-208ENST00000520957 TTC28Q96AY4 2481 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 A0A1B0GTH6 734 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 AP1G2O75843 785 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 TPM2P07951 284 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 UCHL3P15374 230 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 CD19P15391 556 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 PTPN2P17706 415 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 MTHFRP42898 656 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 MAGEA11P43364 429 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 ZNF132P52740 706 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 MFAP3P55082 362 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 USP46P62068 366 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 NR1I3Q14994 352 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 RTL10Q7L3V2 364 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 TMC8Q8IU68 726 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 ING5Q8WYH8 240 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 JAKMIP2Q96AA8 810 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 RIPOR3Q96MK2 946 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 CD320Q9NPF0 282 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 KRT82Q9NSB4 513 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 MAGED2Q9UNF1 606 aaPredicted RBP13.14□□□□□ -0.31
CLK4-208ENST00000520957 TRIOO75962 3097 aa13.14□□□□□ -0.31
CLK4-208ENST00000520957 SLC38A8A6NNN8 435 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 TULP2O00295 520 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 CYP26A1O43174 497 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 MOSPD3O75425 235 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 CFHP08603 1231 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 MYL4P12829 197 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 BRD2P25440 801 aaKnown RBP13.13□□□□□ -0.31
CLK4-208ENST00000520957 MAP3K7CLP57077 242 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 RAPGEF1Q13905 1077 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 DRAP1Q14919 205 aaPredicted RBP13.13□□□□□ -0.31
CLK4-208ENST00000520957 PABPC1LQ4VXU2 614 aaKnown RBP13.13□□□□□ -0.31
CLK4-208ENST00000520957 VSTM1Q6UX27 236 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 TTC30AQ86WT1 665 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 TTC39CQ8N584 583 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 SCAMP5Q8TAC9 235 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 UBA3Q8TBC4 463 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 SHC3Q92529 594 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 PCMTD1Q96MG8 357 aaPredicted RBP13.13□□□□□ -0.31
CLK4-208ENST00000520957 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 MYADMQ96S97 322 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 PHF7Q9BWX1 381 aaPredicted RBP13.13□□□□□ -0.31
CLK4-208ENST00000520957 NLRC4Q9NPP4 1024 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 PLCB1Q9NQ66 1216 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 DOCK6Q96HP0 2047 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 CLUHO75153 1309 aa13.13□□□□□ -0.31
CLK4-208ENST00000520957 AP5Z1O43299 807 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 FSHRP23945 695 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
CLK4-208ENST00000520957 YWHAEP62258 255 aaKnown RBP13.12□□□□□ -0.31
CLK4-208ENST00000520957 RPL10AP62906 217 aaKnown RBP13.12□□□□□ -0.31
CLK4-208ENST00000520957 PLD1Q13393 1074 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 PUS10Q3MIT2 529 aaKnown RBP13.12□□□□□ -0.31
CLK4-208ENST00000520957 CYP26C1Q6V0L0 522 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 CLEC20AQ6ZU45 233 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 GET4Q7L5D6 327 aaPredicted RBP13.12□□□□□ -0.31
CLK4-208ENST00000520957 GPRIN1Q7Z2K8 1008 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 TMEM150AQ86TG1 271 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 IL21Q9HBE4 155 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 IFNKQ9P0W0 207 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
CLK4-208ENST00000520957 A0A1W2PRU2 124 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 C2CD4DB7Z1M9 353 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 O00370 1275 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 TNFRSF10BO14763 440 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 POU2F2P09086 479 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 FAM200BP0CF97 657 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 VDRP11473 427 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 CEBPBP17676 345 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 CLCN1P35523 988 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 UBASH3AP57075 661 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 TPM4P67936 248 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 IFRD2Q12894 506 aaPredicted RBP13.12□□□□□ -0.31
CLK4-208ENST00000520957 GOLGA7BQ2TAP0 167 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 SGO2Q562F6 1265 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 TJAP1Q5JTD0 557 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 PRSS36Q5K4E3 855 aa13.12□□□□□ -0.31
CLK4-208ENST00000520957 STXBP5Q5T5C0 1151 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms