RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 TFAP2BQ92481 460 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 LPIN2Q92539 896 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 NAP1L4Q99733 375 aaKnown RBP4.91□□□□□ -1.62
SQLE-204ENST00000520493 ZMAT3Q9HA38 289 aaKnown RBP4.91□□□□□ -1.62
SQLE-204ENST00000520493 PTPRHQ9HD43 1115 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 SLAMF7Q9NQ25 335 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 ABCF2Q9UG63 623 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 PCDHA3Q9Y5H8 950 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.91□□□□□ -1.62
SQLE-204ENST00000520493 A0A0B4J269 797 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 NT5C1B-RDH14C9J2C7 533 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 F5H697 171 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 MGST3O14880 152 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 PROP1O75360 226 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 WDHD1O75717 1129 aaPredicted RBP4.9□□□□□ -1.63
SQLE-204ENST00000520493 CHRM2P08172 466 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 RARBP10826 455 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 EN2P19622 333 aaPredicted RBP4.9□□□□□ -1.63
SQLE-204ENST00000520493 GPD1P21695 349 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 PRIM2P49643 509 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 ZNF135P52742 658 aaPredicted RBP4.9□□□□□ -1.63
SQLE-204ENST00000520493 MAPK10P53779 464 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 MC2RQ01718 297 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 STK3Q13188 491 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 TUBB3Q13509 450 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 CNGA2Q16280 664 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 FAM153CQ494X1 144 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 XRRA1Q6P2D8 792 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 PEG10Q86TG7 708 aaKnown RBP4.9□□□□□ -1.63
SQLE-204ENST00000520493 FAM90A1Q86YD7 464 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 FAM98AQ8NCA5 519 aaKnown RBP4.9□□□□□ -1.63
SQLE-204ENST00000520493 MYCBPAPQ8TBZ2 947 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 BRIX1Q8TDN6 353 aaKnown RBP4.9□□□□□ -1.63
SQLE-204ENST00000520493 ZNF384Q8TF68 577 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 DDX17Q92841 729 aaKnown RBP4.9□□□□□ -1.63
SQLE-204ENST00000520493 RIPOR3Q96MK2 946 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 WDR12Q9GZL7 423 aaKnown RBP4.9□□□□□ -1.63
SQLE-204ENST00000520493 KLK15Q9H2R5 256 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 ZDHHC8Q9ULC8 765 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 LRCH1Q9Y2L9 728 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 SPATA31A3Q5VYP0 1347 aa4.9□□□□□ -1.63
SQLE-204ENST00000520493 TBX3O15119 743 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 IL18RAPO95256 599 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 CDK4P11802 303 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 PPP3CBP16298 524 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 ZNF37AP17032 561 aaPredicted RBP4.89□□□□□ -1.63
SQLE-204ENST00000520493 ITGALP20701 1170 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 PRDX5P30044 214 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 NDUFV1P49821 464 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 ARFIP2P53365 341 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 SOX10P56693 466 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 FMO1Q01740 532 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 ZNF543Q08ER8 600 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 SLC30A10Q6XR72 485 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 MYRIPQ8NFW9 859 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 NTN5Q8WTR8 489 aaPredicted RBP4.89□□□□□ -1.63
SQLE-204ENST00000520493 NMD3Q96D46 503 aaKnown RBP4.89□□□□□ -1.63
SQLE-204ENST00000520493 MRGPRX1Q96LB2 322 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 APOL5Q9BWW9 433 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 DPH1Q9BZG8 443 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 TPSD1Q9BZJ3 242 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 ARMT1Q9H993 441 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 PPCSQ9HAB8 311 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 ZNF287Q9HBT7 754 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 CPNE5Q9HCH3 593 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 ALG13Q9NP73 1137 aaKnown RBP4.89□□□□□ -1.63
SQLE-204ENST00000520493 PNPLA8Q9NP80 782 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 ASB6Q9NWX5 421 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 TERF2IPQ9NYB0 399 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 FNIP2Q9P278 1114 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 ANAPC4Q9UJX5 808 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 OGDHLQ9ULD0 1010 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 ENTPD2Q9Y5L3 495 aa4.89□□□□□ -1.63
SQLE-204ENST00000520493 LRRC14BA6NHZ5 514 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 E9PLN8 166 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 F5H423 210 aaPredicted RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 GCOM1H8Y6P7 765 aaPredicted RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 FGF18O76093 207 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 URI1O94763 535 aaPredicted RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 THP07101 528 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 TNFSF4P23510 183 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 NHLH1Q02575 133 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 DAG1Q14118 895 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 HABP2Q14520 560 aaPredicted RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 KIF22Q14807 665 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 PDCD2Q16342 344 aaPredicted RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 TXNRD1Q16881 649 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 KHDC1LQ5JSQ8 128 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 TSTD2Q5T7W7 516 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 POC1BQ8TC44 478 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 TNPO1Q92973 898 aaKnown RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 OSBPL9Q96SU4 736 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 TIMP4Q99727 224 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 VKORC1Q9BQB6 163 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 ALG8Q9BVK2 526 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 MRPL46Q9H2W6 279 aaKnown RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 GPR35Q9HC97 309 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 SERHLQ9NQF3 203 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms