RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 DCAF12L1Q5VU92 463 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 CHST15Q7LFX5 561 aaPredicted RBP4.61□□□□□ -1.67
SKP1-205ENST00000519054 LRTOMTQ8WZ04 291 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 ZNF764Q96H86 408 aaPredicted RBP4.61□□□□□ -1.67
SKP1-205ENST00000519054 SUCLG2Q96I99 432 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 PUS7Q96PZ0 661 aaKnown RBP4.61□□□□□ -1.67
SKP1-205ENST00000519054 BHMT2Q9H2M3 363 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 ARHGEF3Q9NR81 526 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 STK32BQ9NY57 414 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 ARHGEF17Q96PE2 2063 aaPredicted RBP4.61□□□□□ -1.67
SKP1-205ENST00000519054 GCOM1H8Y6P7 765 aaPredicted RBP4.6□□□□□ -1.67
SKP1-205ENST00000519054 ZBED1O96006 694 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 FESP07332 822 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 IL6RP08887 468 aaPredicted RBP4.6□□□□□ -1.67
SKP1-205ENST00000519054 JUPP14923 745 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 NDUFB7P17568 137 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 GPD1P21695 349 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 ITPKBP27987 946 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 ADORA2AP29274 412 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 ALDH9A1P49189 494 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 GALEQ14376 348 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 CNGA2Q16280 664 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 C3orf38Q5JPI3 329 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 DEPDC1Q5TB30 811 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 DARS2Q6PI48 645 aaKnown RBP4.6□□□□□ -1.67
SKP1-205ENST00000519054 ZNF551Q7Z340 670 aaPredicted RBP4.6□□□□□ -1.67
SKP1-205ENST00000519054 SRGAP1Q7Z6B7 1085 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 ZNF575Q86XF7 245 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 GAS2L3Q86XJ1 694 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 SLC15A3Q8IY34 581 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 OR56A3Q8NH54 315 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 NTN5Q8WTR8 489 aaPredicted RBP4.6□□□□□ -1.67
SKP1-205ENST00000519054 NELL1Q92832 810 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 GLG1Q92896 1179 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 TIFAQ96CG3 184 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 R3HDM4Q96D70 268 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 TIMP4Q99727 224 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 ZNF518BQ9C0D4 1074 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 GLOD4Q9HC38 313 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 PRDM11Q9NQV5 511 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 SERTAD4Q9NUC0 356 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 ZSCAN32Q9NX65 697 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 ARPP21Q9UBL0 812 aaPredicted RBP4.6□□□□□ -1.67
SKP1-205ENST00000519054 ADAM21Q9UKJ8 722 aa4.6□□□□□ -1.67
SKP1-205ENST00000519054 A1L4Q6 167 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 TRIM43BA6NCK2 446 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 ISM1B1AKI9 464 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 MASP2O00187 686 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 GOLIM4O00461 696 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 FRS3O43559 492 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 MAP4K4O95819 1239 aaPredicted RBP4.59□□□□□ -1.67
SKP1-205ENST00000519054 CSF1RP07333 972 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 ZKSCAN1P17029 563 aaPredicted RBP4.59□□□□□ -1.67
SKP1-205ENST00000519054 WT1P19544 449 aaPredicted RBP4.59□□□□□ -1.67
SKP1-205ENST00000519054 DRD4P21917 467 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 KCNA3P22001 575 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 PEX2P28328 305 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 CYP2C18P33260 490 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 PDE6CP51160 858 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 DGKEP52429 567 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 PRKAG1P54619 331 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 PDE1AP54750 535 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 POLD3Q15054 466 aaPredicted RBP4.59□□□□□ -1.67
SKP1-205ENST00000519054 MICU3Q86XE3 530 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 BPIFB1Q8TDL5 484 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 TMEM171Q8WVE6 324 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 TRIM43Q96BQ3 446 aaPredicted RBP4.59□□□□□ -1.67
SKP1-205ENST00000519054 SARAFQ96BY9 339 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 LRRC27Q9C0I9 530 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 A1CFQ9NQ94 594 aaKnown RBP4.59□□□□□ -1.67
SKP1-205ENST00000519054 AFF4Q9UHB7 1163 aaKnown RBP4.59□□□□□ -1.67
SKP1-205ENST00000519054 OGDHLQ9ULD0 1010 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 PCDHGB6Q9Y5F9 930 aa4.59□□□□□ -1.67
SKP1-205ENST00000519054 FNDC1Q4ZHG4 1894 aaPredicted RBP4.58□□□□□ -1.68
SKP1-205ENST00000519054 PYCARD-AS1I3L0S3 204 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 MGEA5O60502 916 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 PARNO95453 639 aaKnown RBP4.58□□□□□ -1.68
SKP1-205ENST00000519054 C1RP00736 705 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 HRGP04196 525 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 MYF5P13349 255 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 RHCEP18577 417 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 ATXN1P54253 815 aaKnown RBP4.58□□□□□ -1.68
SKP1-205ENST00000519054 FAM193AP78312 1265 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 FMO1Q01740 532 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 RHDQ02161 417 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 LY6KQ17RY6 165 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 PTCHD3Q3KNS1 767 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 ZDHHC24Q6UX98 284 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 LRRC71Q8N4P6 559 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 OSCP1Q8WVF1 389 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 XAGE5Q8WWM1 108 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 PPP2R3CQ969Q6 453 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 SPSB4Q96A44 273 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 APIPQ96GX9 242 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 STK31Q9BXU1 1019 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 ZNF287Q9HBT7 754 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 CCNL1Q9UK58 526 aaPredicted RBP4.58□□□□□ -1.68
SKP1-205ENST00000519054 PADI4Q9UM07 663 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 WNT6Q9Y6F9 365 aa4.58□□□□□ -1.68
SKP1-205ENST00000519054 FER1L4A9Z1Z3 1794 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms