RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 SLC26A4O43511 780 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 CHRM1P11229 460 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 ENGP17813 658 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 CYP2F1P24903 491 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 HOXD12P35452 270 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 PNPLA4P41247 253 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 GTF2BQ00403 316 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 GAB4Q2WGN9 574 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 CFAP221Q4G0U5 840 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 HSF5Q4G112 596 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 INTS6LQ5JSJ4 861 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 PEAR1Q5VY43 1037 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 SLFN12LQ6IEE8 588 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 SLC23A3Q6PIS1 610 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 NT5DC4Q86YG4 428 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 PDCL2Q8N4E4 241 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 MYCT1Q8N699 235 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 ARL14EPQ8N8R7 260 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 CDK5RAP3Q96JB5 506 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 SPACA7Q96KW9 195 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 FNBP1Q96RU3 617 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 PLIN2Q99541 437 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 LINC00597Q9H2U6 94 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 KLK13Q9UKR3 277 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 MYH11P35749 1972 aa13.27□□□□□ -0.29
TRAPPC9-204ENST00000518723 IGSF10Q6WRI0 2623 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 LOC400499M0QZD8 3231 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 ANKRD63C9JTQ0 380 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 TRAK2O60296 914 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 FAM13AO94988 1023 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 CAPNS1P04632 268 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 HNRNPLP14866 589 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 PFKLP17858 780 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 PTGER3P43115 390 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 MAPK8P45983 427 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 PDE6CP51160 858 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 SEC13P55735 322 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 SIM1P81133 766 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 KCNB1Q14721 858 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 ZC2HC1CQ53FD0 456 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 LMBRD2Q68DH5 695 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 ADALQ6DHV7 355 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 THADAQ6YHU6 1953 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 GPBP1Q86WP2 473 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 TMEM86AQ8N2M4 240 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 CCDC33Q8N5R6 958 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 FSIP1Q8NA03 581 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 TTC16Q8NEE8 873 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 SPATA18Q8TC71 538 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 WHAMMQ8TF30 809 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 GCN1Q92616 2671 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 FUBP3Q96I24 572 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 TMEM74BQ9NUR3 256 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 DDX43Q9NXZ2 648 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 AGO2Q9UKV8 859 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 L1RE1Q9UN81 338 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 MYO16Q9Y6X6 1858 aa13.26□□□□□ -0.29
TRAPPC9-204ENST00000518723 ZNF638Q14966 1978 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 ANK1P16157 1881 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 SPAARA0A1B0GVQ0 90 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 C2orf78A6NCI8 922 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 ANTXRLA6NF34 631 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 IL18RAPO95256 599 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 HDCP19113 662 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 EIF2DP41214 584 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 MAGEA11P43364 429 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 MYL7Q01449 175 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 BYSLQ13895 437 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 MAP7D1Q3KQU3 841 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 RILPL1Q5EBL4 403 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 LYSMD4Q5XG99 296 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 ARL6IP4Q66PJ3 421 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 CRELD2Q6UXH1 353 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 TMEFF1Q8IYR6 380 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 IL17RCQ8NAC3 791 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 LRRC15Q8TF66 581 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 RLN3Q8WXF3 142 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 MBD1Q9UIS9 605 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 PILRBQ9UKJ0 227 aa13.25□□□□□ -0.29
TRAPPC9-204ENST00000518723 GON4LQ3T8J9 2241 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 SETXQ7Z333 2677 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 A0A0A0MRY4 1105 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 VWA3AA6NCI4 1184 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 TISP43B9A030 160 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 MAP3K13O43283 966 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 HUS1O60921 280 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 CYP17A1P05093 508 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 ZXDBP98169 803 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 PROSER1Q86XN7 944 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 ALLCQ8N6M5 410 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 LRRC52Q8N7C0 313 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 TXNDC5Q8NBS9 432 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 CEP76Q8TAP6 659 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 SPATA17Q96L03 361 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 AK8Q96MA6 479 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 CEP295NLQ96MC4 621 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms