RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 VTNP04004 478 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 CUL1Q13616 776 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 UAP1Q16222 522 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-206ENST00000518074 CCDC105Q8IYK2 499 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 LRRC71Q8N4P6 559 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 BCAS4Q8TDM0 211 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 PPP1R16BQ96T49 567 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 OSMRQ99650 979 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 ADAM2Q99965 735 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 ZSWIM1Q9BR11 485 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 NTPCRQ9BSD7 190 aaKnown RBP11.59□□□□□ -0.55
SPIDR-206ENST00000518074 HAPLN2Q9GZV7 340 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 CARD9Q9H257 536 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 LRRC4CQ9HCJ2 640 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 PRDM6Q9NQX0 595 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 RBAKQ9NYW8 714 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-206ENST00000518074 BLOC1S6Q9UL45 172 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 USTQ9Y2C2 406 aa11.59□□□□□ -0.55
SPIDR-206ENST00000518074 CHD9Q3L8U1 2897 aa11.58□□□□□ -0.55
SPIDR-206ENST00000518074 TLDC2A0PJX2 215 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 HMGB1P1B2RPK0 211 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-206ENST00000518074 ASAP2O43150 1006 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 MGEA5O60502 916 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 SKIP12755 728 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 IFFO1Q0D2I5 559 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 NFX1Q12986 1120 aaKnown RBP11.58□□□□□ -0.56
SPIDR-206ENST00000518074 PCBP1Q15365 356 aaKnown RBP eCLIP11.58□□□□□ -0.56
SPIDR-206ENST00000518074 SEL1L2Q5TEA6 688 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 TMEM270Q6UE05 265 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 CCDC25Q86WR0 208 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 ZDHHC14Q8IZN3 488 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 C1orf54Q8WWF1 131 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 TCP11Q8WWU5 503 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 SLITRK6Q9H5Y7 841 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 AAASQ9NRG9 546 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 UTP6Q9NYH9 597 aaKnown RBP11.58□□□□□ -0.56
SPIDR-206ENST00000518074 CPSF2Q9P2I0 782 aaKnown RBP11.58□□□□□ -0.56
SPIDR-206ENST00000518074 PCDHB4Q9Y5E5 795 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 TRIM66O15016 1216 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 CLDN3O15551 220 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 EOMESO95936 686 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 EDN1P05305 212 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 CD58P19256 250 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 CTNNB1P35222 781 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 UBE3AQ05086 875 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 TDRD10Q5VZ19 366 aaKnown RBP11.58□□□□□ -0.56
SPIDR-206ENST00000518074 C10orf67Q8IYJ2 551 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 CYFIP2Q96F07 1278 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 HEMGNQ9BXL5 484 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 NSUN3Q9H649 340 aaKnown RBP11.58□□□□□ -0.56
SPIDR-206ENST00000518074 DHX33Q9H6R0 707 aaKnown RBP11.58□□□□□ -0.56
SPIDR-206ENST00000518074 ARHGAP28Q9P2N2 729 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 FNDC1Q4ZHG4 1894 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-206ENST00000518074 KIAA1671Q9BY89 1806 aa11.58□□□□□ -0.56
SPIDR-206ENST00000518074 EXTL3O43909 919 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 MYZAPP0CAP1 466 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 BMP1P13497 986 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 RRM1P23921 792 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 HSPA9P38646 679 aaKnown RBP11.57□□□□□ -0.56
SPIDR-206ENST00000518074 VPS41P49754 854 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 PTENP60484 403 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 SNRPFP62306 86 aaKnown RBP11.57□□□□□ -0.56
SPIDR-206ENST00000518074 POU5F1BQ06416 359 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 SF3A3Q12874 501 aaKnown RBP eCLIP11.57□□□□□ -0.569e-19■■■■■ 36
SPIDR-206ENST00000518074 TRIP13Q15645 432 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-206ENST00000518074 JAMLQ86YT9 394 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 PRELID2Q8N945 189 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 OR5B17Q8NGF7 314 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 LRRC45Q96CN5 670 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 THOC1Q96FV9 657 aaKnown RBP11.57□□□□□ -0.56
SPIDR-206ENST00000518074 NAP1L3Q99457 506 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-206ENST00000518074 FMO2Q99518 471 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 C11orf70Q9BRQ4 267 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 MRPL42Q9Y6G3 142 aaKnown RBP11.57□□□□□ -0.56
SPIDR-206ENST00000518074 IVLP07476 585 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 NR1D1P20393 614 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 TSNAXIP1Q2TAA8 658 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 LEXMQ3ZCV2 418 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 ACAD10Q6JQN1 1059 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 TTC27Q6P3X3 843 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 C17orf50Q8WW18 174 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 PRPF31Q8WWY3 499 aaKnown RBP11.57□□□□□ -0.56
SPIDR-206ENST00000518074 C17orf75Q9HAS0 396 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 DNAJC17Q9NVM6 304 aaKnown RBP11.57□□□□□ -0.56
SPIDR-206ENST00000518074 ARID2Q68CP9 1835 aa11.57□□□□□ -0.56
SPIDR-206ENST00000518074 MAPK13O15264 365 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 CSDE1O75534 798 aaKnown RBP11.56□□□□□ -0.56
SPIDR-206ENST00000518074 TNFSF9P41273 254 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 KRT71Q3SY84 523 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 PDE12Q6L8Q7 609 aaKnown RBP11.56□□□□□ -0.56
SPIDR-206ENST00000518074 CCDC137Q6PK04 289 aaKnown RBP11.56□□□□□ -0.56
SPIDR-206ENST00000518074 CCDC50Q8IVM0 306 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 FBXO25Q8TCJ0 367 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 ATG4AQ8WYN0 398 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 FBXL18Q96ME1 805 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 ERP44Q9BS26 406 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 RETREG1Q9H6L5 497 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 MTUS1Q9ULD2 1270 aa11.56□□□□□ -0.56
SPIDR-206ENST00000518074 GINS2Q9Y248 185 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms