RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ATG7O95352 703 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 APPP05067 770 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 ARSAP15289 507 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 UBA1P22314 1058 aaKnown RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 CHMLP26374 656 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 EPHA8P29322 1005 aaPredicted RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 CD6P30203 668 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 ANP32AP39687 249 aaKnown RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 GRIA4P48058 902 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 RFX5P48382 616 aaPredicted RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 CDK8P49336 464 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 TIMM10P62072 90 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 CDC20Q12834 499 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 BNIP3Q12983 259 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 USP4Q13107 963 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 MVPQ14764 893 aaKnown RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 RTP2Q5QGT7 225 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 STXBP5Q5T5C0 1151 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 NUGGCQ68CJ6 796 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 GLB1LQ6UWU2 654 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 CRELD2Q6UXH1 353 aaPredicted RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 MEX3BQ6ZN04 569 aaKnown RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 CHSY3Q70JA7 882 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 HIPK1Q86Z02 1210 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 CERS3Q8IU89 383 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 ZNF808Q8N4W9 903 aaPredicted RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 MIGA1Q8NAN2 632 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 MAPK15Q8TD08 544 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 STAG1Q8WVM7 1258 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 UBE2Q2Q8WVN8 375 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 RSPH1Q8WYR4 309 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 FAM193BQ96PV7 902 aaPredicted RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 IWS1Q96ST2 819 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 SMOQ99835 787 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 FAM83CQ9BQN1 747 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 LARP6Q9BRS8 491 aaKnown RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 USP29Q9HBJ7 922 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 TM9SF3Q9HD45 589 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 COPRSQ9NQ92 184 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 ZBTB40Q9NUA8 1239 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 OBP2AQ9NY56 170 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 ISY1Q9ULR0 285 aaKnown RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 EPN1Q9Y6I3 576 aaPredicted RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 COL27A1Q8IZC6 1860 aaPredicted RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 ARID1BQ8NFD5 2236 aaPredicted RBP3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 AKAP6Q13023 2319 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 PRAMEF33A0A0G2JMD5 474 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 MEIS3P2A8K0S8 358 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 METTL12A8MUP2 240 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 K7ELQ4 463 aaPredicted RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 NVLO15381 856 aaKnown RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 SIGLEC6O43699 453 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 PLA2G6O60733 806 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 PRAMEF10O60809 474 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 OFD1O75665 1012 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 RLBP1P12271 317 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 TGM2P21980 687 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 CYP7A1P22680 504 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 OAS2P29728 719 aaKnown RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 UGT1A5P35504 534 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 IL15P40933 162 aaPredicted RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 OR1G1P47890 313 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 ITGA1P56199 1179 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 SSRP1Q08945 709 aaKnown RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 IKQ13123 557 aaPredicted RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 HSP90AB4PQ58FF6 505 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 SFMBT2Q5VUG0 894 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 PCNX4Q63HM2 1172 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 JMJD6Q6NYC1 403 aaPredicted RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 TMED8Q6PL24 325 aaPredicted RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 RTL10Q7L3V2 364 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 ADAT2Q7Z6V5 191 aaKnown RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 MEX3DQ86XN8 651 aaKnown RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 RAB11FIP4Q86YS3 637 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 NME8Q8N427 588 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 FBXO39Q8N4B4 442 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 TMEM57Q8N5G2 664 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 CADM4Q8NFZ8 388 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 SHKBP1Q8TBC3 707 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 SSH3Q8TE77 659 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 SNX19Q92543 992 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 RELTQ969Z4 430 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 MBD6Q96DN6 1003 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 TOE1Q96GM8 510 aaKnown RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 XAGE2Q96GT9 111 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 CCDC136Q96JN2 1154 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 ACAP3Q96P50 834 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 TAAR1Q96RJ0 339 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 PPP1R16BQ96T49 567 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 MEIS3Q99687 375 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 BACH2Q9BYV9 841 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 GPR62Q9BZJ7 368 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 ZNF696Q9H7X3 374 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 PREBQ9HCU5 417 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 FOXJ2Q9P0K8 574 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 NKX1-2Q9UD57 310 aaPredicted RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 CLIP2Q9UDT6 1046 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 TLK1Q9UKI8 766 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms