RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 SIDT1Q9NXL6 827 aaKnown RBP3.15□□□□□ -1.91
RNU6-1046P-201ENST00000516538 CALCOCO1Q9P1Z2 691 aa3.15□□□□□ -1.91
RNU6-1046P-201ENST00000516538 MAPRE3Q9UPY8 281 aa3.15□□□□□ -1.91
RNU6-1046P-201ENST00000516538 GPR45Q9Y5Y3 372 aa3.15□□□□□ -1.91
RNU6-1046P-201ENST00000516538 CNOT3O75175 753 aaKnown RBP3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 PDE8BO95263 885 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 PRKCBP05771 671 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 GJB1P08034 283 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ID4P47928 161 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ALDH5A1P51649 535 aaPredicted RBP3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 TKFCQ3LXA3 575 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 L1TD1Q5T7N2 865 aaKnown RBP3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 SLC15A3Q8IY34 581 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 R3HDM4Q96D70 268 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 LMLNQ96KR4 655 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 CCDC17Q96LX7 622 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 NLRP4Q96MN2 994 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 SERTAD3Q9UJW9 196 aa3.14□□□□□ -1.91
RNU6-1046P-201ENST00000516538 A1L4Q6 167 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 NTN3O00634 580 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 PDE8AO60658 829 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 SYF2O95926 243 aaKnown RBP3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 PHKG2P15735 406 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 SLC16A1P53985 500 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 TLE1Q04724 770 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ZNF324BQ6AW86 544 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 MMP21Q8N119 569 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 DDX17Q92841 729 aaKnown RBP3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 GLG1Q92896 1179 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ZNF479Q96JC4 524 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 THAP7Q9BT49 309 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 DPCDQ9BVM2 203 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 GPR35Q9HC97 309 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 C14orf119Q9NWQ9 140 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 PCDHA13Q9Y5I0 950 aa3.13□□□□□ -1.91
RNU6-1046P-201ENST00000516538 CAMTA2O94983 1202 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 KIF20AO95235 890 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 GNAI2P04899 355 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 RARBP10826 455 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 FGF3P11487 239 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 PPIFP30405 207 aaKnown RBP3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 KCNJ4P48050 445 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 LOXL3P58215 753 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 DDX46Q7L014 1031 aaKnown RBP3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ZNF329Q86UD4 541 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 AMOTL1Q8IY63 956 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 B4GALNT2Q8NHY0 566 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ZNF398Q8TD17 642 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ATG4AQ8WYN0 398 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 MAP4K1Q92918 833 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ATP2A3Q93084 1043 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 AHCYL2Q96HN2 611 aaKnown RBP3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 CLPTM1LQ96KA5 538 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 DNAJC2Q99543 621 aaKnown RBP3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ZSWIM4Q9H7M6 989 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 FANCLQ9NW38 375 aa3.12□□□□□ -1.91
RNU6-1046P-201ENST00000516538 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 IGLV5-39A0A0G2JS06 123 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 FOXN3O00409 490 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 TNFRSF13BO14836 293 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 MYCLP12524 364 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 AGXTP21549 392 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 GPR3P46089 330 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 KRT71Q3SY84 523 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ARHGAP40Q5TG30 622 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 PPM1NQ8N819 430 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 MRGPRX4Q96LA9 322 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 SLC2A13Q96QE2 648 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 SLAMF7Q9NQ25 335 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ZBTB40Q9NUA8 1239 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 MAFFQ9ULX9 164 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 WASHC2AQ641Q2 1341 aa3.11□□□□□ -1.91
RNU6-1046P-201ENST00000516538 TCRBV5S1A1TA0A578 114 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 F2RL2O00254 374 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 GRID2O43424 1007 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 BRINP1O60477 761 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 CDC45O75419 566 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ATXN1LP0C7T5 689 aaKnown RBP3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 CTSAP10619 480 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 MYCLP1P12525 358 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 SMARCA1P28370 1054 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 PGGT1BP53609 377 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 RPL36AP83881 106 aaKnown RBP3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 SATB1Q01826 763 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 TCF15Q12870 199 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 STRN3Q13033 797 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 E2F2Q14209 437 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 INPP5JQ15735 1006 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 TMEM63BQ5T3F8 832 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 PPP1R32Q7Z5V6 425 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 CAMK1GQ96NX5 476 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 LENG8Q96PV6 779 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 ICAM5Q9UMF0 924 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 GABRQQ9UN88 632 aa3.1□□□□□ -1.91
RNU6-1046P-201ENST00000516538 TRIP12Q14669 1992 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1046P-201ENST00000516538 M0QYG6 137 aa3.09□□□□□ -1.91
RNU6-1046P-201ENST00000516538 THBS4P35443 961 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms