RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 WNT16Q9UBV4 365 aa1.05□□□□□ -2.24
SCARNA23-201ENST00000516060 TRIOBPQ9H2D6 2365 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 ZNF891A8MT65 544 aaPredicted RBP1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 BTBD19C9JJ37 291 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 POLRMTO00411 1230 aaKnown RBP1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 PLD2O14939 933 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 GRM6O15303 877 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 GAS7O60861 476 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 SLC43A1O75387 559 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 RNF8O76064 485 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 NDUFB8O95169 186 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 FLT3P36888 993 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 IL6STP40189 918 aaPredicted RBP1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 GLIPR1P48060 266 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 SOX8P57073 446 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 CTXN1P60606 82 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 B4GALNT1Q00973 533 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 SP2Q02086 613 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 PPATQ06203 517 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 SLC1A5Q15758 541 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 CCDC6Q16204 474 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 UGT8Q16880 541 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 SLC4A8Q2Y0W8 1093 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 ODF3L2Q3SX64 289 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 CFAP100Q494V2 611 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 INO80DQ53TQ3 878 aaPredicted RBP1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 RNASE12Q5GAN4 147 aaKnown RBP1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 L1TD1Q5T7N2 865 aaKnown RBP1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 TAF2Q6P1X5 1199 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 SLC39A5Q6ZMH5 540 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 RFX8Q6ZV50 586 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 ZNF365Q70YC5 407 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 BCDIN3DQ7Z5W3 292 aaKnown RBP1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 KIF18BQ86Y91 864 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 IL17RDQ8NFM7 739 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 FATE1Q969F0 183 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 SDF2L1Q9HCN8 221 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 ETAA1Q9NY74 926 aa1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 MYBBP1AQ9BQG0 1328 aaKnown RBP1.04□□□□□ -2.24
SCARNA23-201ENST00000516060 TMEM272A0A1B0GTI8 110 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 CCDC85CA6NKD9 419 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 ZNF814B7Z6K7 855 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 NEMP1O14524 444 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 SOAT2O75908 522 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 PPP1R3DO95685 299 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 IGLV2-11P01706 119 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 PIM1P11309 404 aaPredicted RBP1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 MTHFD1P11586 935 aaKnown RBP1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 ITGALP20701 1170 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 FPR3P25089 353 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 POLD2P49005 469 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 KPNA1P52294 538 aaPredicted RBP1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 ART1P52961 327 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 GNL2Q13823 731 aaKnown RBP1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 ATP2B3Q16720 1220 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 ZNF672Q499Z4 452 aaPredicted RBP1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 SLC9C1Q4G0N8 1177 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 PABPC1LQ4VXU2 614 aaKnown RBP1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 C14orf177Q52M58 125 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 AWAT1Q58HT5 328 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 MUM1L1Q5H9M0 696 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 ZNF772Q68DY9 489 aaPredicted RBP1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 SPSB3Q6PJ21 355 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 MTHFD1LQ6UB35 978 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 TRILQ7L0X0 811 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 JMYQ8N9B5 988 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 PSD4Q8NDX1 1056 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 SH3TC2Q8TF17 1288 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 RAX2Q96IS3 184 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 CCDC17Q96LX7 622 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 NODALQ96S42 347 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 DCTN5Q9BTE1 182 aa1.03□□□□□ -2.24
SCARNA23-201ENST00000516060 WDR81Q562E7 1941 aa1.03□□□□□ -2.25
SCARNA23-201ENST00000516060 BTBD18B2RXH4 712 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 GCATO75600 419 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 TBXAS1P24557 533 aaPredicted RBP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 ALDH7A1P49419 539 aaKnown RBP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 ERVK11-1P61568 191 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 DSC2Q02487 901 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 MGAT2Q10469 447 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 TCEA2Q15560 299 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 FSCN1Q16658 493 aaKnown RBP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 ZIK1Q3SY52 487 aaPredicted RBP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 FNDC3BQ53EP0 1204 aaKnown RBP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 KIAA1755Q5JYT7 1200 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 SRGAP1Q7Z6B7 1085 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 MORC1Q86VD1 984 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 KRTAP7-1Q8IUC3 87 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 ZSWIM2Q8NEG5 633 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 ZNF524Q96C55 264 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 PHF21BQ96EK2 531 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 DOCK7Q96N67 2140 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 SF3B5Q9BWJ5 86 aaKnown RBP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 PACSIN1Q9BY11 444 aa1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 RBM38Q9H0Z9 239 aaKnown RBP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 GZF1Q9H116 711 aaPredicted RBP1.02□□□□□ -2.25
SCARNA23-201ENST00000516060 TCF7L2Q9NQB0 619 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms