RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 CYP4A22Q5TCH4 519 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 GJB7Q6PEY0 223 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 PAQR9Q6ZVX9 377 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 GRASPQ7Z6J2 395 aaPredicted RBP12.63□□□□□ -0.39
SNF8-215ENST00000515572 SCN4BQ8IWT1 228 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 NEK11Q8NG66 645 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 SHC3Q92529 594 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 C8orf48Q96LL4 319 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 CSNK1G1Q9HCP0 422 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
SNF8-215ENST00000515572 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
SNF8-215ENST00000515572 ASAH2Q9NR71 780 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 PRKAG3Q9UGI9 489 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 CLUHO75153 1309 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 DENND4CQ5VZ89 1909 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 DOCK6Q96HP0 2047 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 ZNF638Q14966 1978 aaKnown RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 A0A1W2PQC6 194 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 F8VP50 259 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 CLDN5O00501 218 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 AP1G2O75843 785 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 MICAL2O94851 1124 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 TPM3P06753 285 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 CD19P15391 556 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 EPHA5P54756 1037 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 UBASH3AP57075 661 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 APBA1Q02410 837 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 RAPGEF1Q13905 1077 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 NR1I3Q14994 352 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 TAF12Q16514 161 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 DDR2Q16832 855 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 PABPC1LQ4VXU2 614 aaKnown RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 PPP1R26Q5T8A7 1209 aaPredicted RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 PDZD4Q76G19 769 aaPredicted RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 DNAJB7Q7Z6W7 309 aaPredicted RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 RNF214Q8ND24 703 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 TRMT2BQ96GJ1 504 aaKnown RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 CORO1BQ9BR76 489 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 PHF7Q9BWX1 381 aaPredicted RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 NAA15Q9BXJ9 866 aaKnown RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 STK33Q9BYT3 514 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 GANQ9H2C0 597 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 POMKQ9H5K3 350 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 PNPLA8Q9NP80 782 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 KRT82Q9NSB4 513 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 FAM207AQ9NSI2 230 aaPredicted RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 DNMT3BQ9UBC3 853 aaKnown RBP12.62□□□□□ -0.39
SNF8-215ENST00000515572 FHOD1Q9Y613 1164 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
SNF8-215ENST00000515572 OBSL1O75147 1896 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 COL6A3P12111 3177 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 SLC38A8A6NNN8 435 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 RNF225M0QZC1 329 aaPredicted RBP12.61□□□□□ -0.39
SNF8-215ENST00000515572 O00370 1275 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 TEX33O43247 280 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 MED7O43513 233 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 NOL4O94818 638 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 RHOP08100 348 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 BMP1P13497 986 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 IL9P15248 144 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 NPR3P17342 541 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 FSHRP23945 695 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 ADORA2BP29275 332 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 USP8P40818 1118 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 KLK7P49862 253 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 SLC8A3P57103 927 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 BPIFB4P59827 614 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 PTK2Q05397 1052 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 DRAP1Q14919 205 aaPredicted RBP12.61□□□□□ -0.39
SNF8-215ENST00000515572 TJAP1Q5JTD0 557 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 FAM71AQ8IYT1 594 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 ANKRD52Q8NB46 1076 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 FEZF2Q8TBJ5 459 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 GIPC2Q8TF65 315 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 MYRFLQ96LU7 910 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 NAP1L5Q96NT1 182 aaPredicted RBP12.61□□□□□ -0.39
SNF8-215ENST00000515572 DUSP16Q9BY84 665 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 HCFC1R1Q9NWW0 138 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNF8-215ENST00000515572 UXTQ9UBK9 157 aaPredicted RBP12.61□□□□□ -0.39
SNF8-215ENST00000515572 HESX1Q9UBX0 185 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 CDH22Q9UJ99 828 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 AJAP1Q9UKB5 411 aaPredicted RBP12.61□□□□□ -0.39
SNF8-215ENST00000515572 USTQ9Y2C2 406 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 NR2E1Q9Y466 385 aa12.61□□□□□ -0.39
SNF8-215ENST00000515572 ZFP37Q9Y6Q3 630 aaPredicted RBP12.61□□□□□ -0.39
SNF8-215ENST00000515572 TCF20Q9UGU0 1960 aaKnown RBP12.6□□□□□ -0.39
SNF8-215ENST00000515572 F8VZ95 297 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 FOXN3O00409 490 aaPredicted RBP12.6□□□□□ -0.39
SNF8-215ENST00000515572 CBFA2T2O43439 604 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 RTN3O95197 1032 aaPredicted RBP12.6□□□□□ -0.39
SNF8-215ENST00000515572 CDC25CP30307 473 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 GPR15P49685 360 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 CACNA2D1P54289 1103 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 BCAT1P54687 386 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 POLR2FP61218 127 aaKnown RBP12.6□□□□□ -0.39
SNF8-215ENST00000515572 NTHL1P78549 312 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 CNGA2Q16280 664 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 MEA1Q16626 185 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 GOLGA7BQ2TAP0 167 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms