RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 ANKRD22Q5VYY1 191 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 EEF1DP3Q658K8 133 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 DEFB132Q7Z7B7 95 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 NCAPG2Q86XI2 1143 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 CEP57Q86XR8 500 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 RHPN2Q8IUC4 686 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 C1orf127Q8N9H9 656 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 MZB1Q8WU39 189 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 FGD4Q96M96 766 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 ZWILCHQ9H900 591 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 RPF1Q9H9Y2 349 aaKnown RBP18.36■□□□□ 0.53
SNX2-213ENST00000514949 SAE1Q9UBE0 346 aaPredicted RBP18.36■□□□□ 0.53
SNX2-213ENST00000514949 NXF1Q9UBU9 619 aaKnown RBP18.36■□□□□ 0.53
SNX2-213ENST00000514949 RGS17Q9UGC6 210 aaPredicted RBP18.36■□□□□ 0.53
SNX2-213ENST00000514949 PAPPA2Q9BXP8 1791 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 CILPO75339 1184 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 ERBB2P04626 1255 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 CA4P22748 312 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 ATICP31939 592 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 HIRAP54198 1017 aaPredicted RBP18.35■□□□□ 0.53
SNX2-213ENST00000514949 PTPN11Q06124 597 aaPredicted RBP18.35■□□□□ 0.53
SNX2-213ENST00000514949 PDE4CQ08493 712 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 DNAJC3Q13217 504 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 SLC1A5Q15758 541 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 MSS51Q4VC12 460 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 HP1BP3Q5SSJ5 553 aaPredicted RBP18.35■□□□□ 0.53
SNX2-213ENST00000514949 FBF1Q8TES7 1133 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 RSAD2Q8WXG1 361 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 ALKBH8Q96BT7 664 aaKnown RBP18.35■□□□□ 0.53
SNX2-213ENST00000514949 WDR83Q9BRX9 315 aaKnown RBP18.35■□□□□ 0.53
SNX2-213ENST00000514949 MAK16Q9BXY0 300 aaKnown RBP18.35■□□□□ 0.53
SNX2-213ENST00000514949 SDCBP2Q9H190 292 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 RSAD1Q9HA92 442 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 EBF2Q9HAK2 575 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 CYLDQ9NQC7 956 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 TXLNGQ9NUQ3 528 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 A0A1W2PPM1 405 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 HMGCRP04035 888 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 MARK3P27448 753 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 SMTNL2Q2TAL5 461 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 KCNT1Q5JUK3 1230 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 CCDC62Q6P9F0 684 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 FAM47EQ6ZV65 393 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 TRIM50Q86XT4 487 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 C4orf33Q8N1A6 199 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 CEP120Q8N960 986 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 ZNF398Q8TD17 642 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 LRRC8CQ8TDW0 803 aa18.35■□□□□ 0.53
SNX2-213ENST00000514949 PAIP2Q9BPZ3 127 aaKnown RBP18.35■□□□□ 0.53
SNX2-213ENST00000514949 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNX2-213ENST00000514949 NOP56O00567 594 aaKnown RBP18.34■□□□□ 0.53
SNX2-213ENST00000514949 B4GALT5O43286 388 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 HBP1O60381 514 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 SLC25A27O95847 323 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 TRUB2O95900 331 aaKnown RBP18.34■□□□□ 0.53
SNX2-213ENST00000514949 KRT16P08779 473 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 CXCL8P10145 99 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 MIPP30301 263 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 STIP1P31948 543 aaKnown RBP18.34■□□□□ 0.53
SNX2-213ENST00000514949 GPD2P43304 727 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 SETDB1Q15047 1291 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 C3orf62Q6ZUJ4 267 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 IFNLR1Q8IU57 520 aaPredicted RBP18.34■□□□□ 0.53
SNX2-213ENST00000514949 TMEM176AQ96HP8 235 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 SMARCAD1Q9H4L7 1026 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 METTL5Q9NRN9 209 aaKnown RBP18.34■□□□□ 0.53
SNX2-213ENST00000514949 INO80B-WBP1J3KQ70 363 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 TM9SF1O15321 606 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 CNMDO75829 334 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 CD48P09326 243 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 KRT4P19013 534 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 ALDH3A1P30838 453 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 SSTR1P30872 391 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 RAP1GAPP47736 663 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 ZNF143P52747 638 aaPredicted RBP18.34■□□□□ 0.53
SNX2-213ENST00000514949 DYNLT1P63172 113 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 GAD2Q05329 585 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 PARP6Q2NL67 630 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 POTEAQ6S8J7 498 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 ANKMY2Q8IV38 441 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 UNC45BQ8IWX7 931 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 PDIK1LQ8N165 341 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 ZNF276Q8N554 614 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 KCTD6Q8NC69 237 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 INO80BQ9C086 356 aaPredicted RBP18.34■□□□□ 0.53
SNX2-213ENST00000514949 ELOVL4Q9GZR5 314 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 ASB7Q9H672 318 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 PRMT7Q9NVM4 692 aaPredicted RBP18.34■□□□□ 0.53
SNX2-213ENST00000514949 GEMIN8Q9NWZ8 242 aaKnown RBP18.34■□□□□ 0.53
SNX2-213ENST00000514949 USP18Q9UMW8 372 aa18.34■□□□□ 0.53
SNX2-213ENST00000514949 DNAJC25-GNG10A0A024R161 153 aa18.33■□□□□ 0.52
SNX2-213ENST00000514949 GOLGA8MH3BSY2 632 aa18.33■□□□□ 0.52
SNX2-213ENST00000514949 DCTN3O75935 186 aa18.33■□□□□ 0.52
SNX2-213ENST00000514949 RNF8O76064 485 aa18.33■□□□□ 0.52
SNX2-213ENST00000514949 MICAL2O94851 1124 aa18.33■□□□□ 0.52
SNX2-213ENST00000514949 TMEM63AO94886 807 aa18.33■□□□□ 0.52
SNX2-213ENST00000514949 MCF2P10911 925 aa18.33■□□□□ 0.52
SNX2-213ENST00000514949 VDRP11473 427 aa18.33■□□□□ 0.52
SNX2-213ENST00000514949 MSH2P43246 934 aa18.33■□□□□ 0.52
SNX2-213ENST00000514949 CDH8P55286 799 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms