RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 PKMYT1Q99640 499 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 GOLPH3Q9H4A6 298 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 CHORDC1Q9UHD1 332 aaPredicted RBP20.82■□□□□ 0.92
SSBP2-218ENST00000514493 NR2E3Q9Y5X4 410 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 SCINQ9Y6U3 715 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 MYBPHLA2RUH7 354 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 CARNS1A5YM72 827 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 TADA3O75528 432 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 GJB5O95377 273 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 TSPY1Q01534 308 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 PDE4CQ08493 712 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 VARS2Q5ST30 1063 aaKnown RBP20.82■□□□□ 0.92
SSBP2-218ENST00000514493 FAM171BQ6P995 826 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 PEX26Q7Z412 305 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 FAM35AQ86V20 835 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 IPO4Q8TEX9 1081 aaKnown RBP20.82■□□□□ 0.92
SSBP2-218ENST00000514493 SLC35F5Q8WV83 523 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 HERVK_113Q902F9 699 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 PCED1BQ96HM7 432 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 ABCB6Q9NP58 842 aa20.82■□□□□ 0.92
SSBP2-218ENST00000514493 CXXC1Q9P0U4 656 aaPredicted RBP20.82■□□□□ 0.92
SSBP2-218ENST00000514493 MRPL42Q9Y6G3 142 aaKnown RBP20.82■□□□□ 0.92
SSBP2-218ENST00000514493 RANBP2P49792 3224 aaKnown RBP20.81■□□□□ 0.92
SSBP2-218ENST00000514493 ERBB2P04626 1255 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 LAG3P18627 525 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 GABRB2P47870 512 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 HTRA4P83105 476 aaPredicted RBP20.81■□□□□ 0.92
SSBP2-218ENST00000514493 CKAP4Q07065 602 aaKnown RBP20.81■□□□□ 0.92
SSBP2-218ENST00000514493 SPOUT1Q5T280 376 aaKnown RBP20.81■□□□□ 0.92
SSBP2-218ENST00000514493 CYP4A22Q5TCH4 519 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 LLGL2Q6P1M3 1020 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 KCNT2Q6UVM3 1135 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 PAQR9Q6ZVX9 377 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 NT5DC3Q86UY8 548 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 STK32AQ8WU08 396 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 ZNF558Q96NG5 402 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 B3GNT5Q9BYG0 378 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 TJP2Q9UDY2 1190 aa20.81■□□□□ 0.92
SSBP2-218ENST00000514493 PACSIN2Q9UNF0 486 aaPredicted RBP20.81■□□□□ 0.92
SSBP2-218ENST00000514493 TCRBV5S1A1TA0A578 114 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 EFCAB8A8MWE9 144 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 TULP2O00295 520 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 CLDN5O00501 218 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 EFEMP2O95967 443 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 NPR3P17342 541 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 MAMLD1Q13495 774 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 RPS6KA1Q15418 735 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 MAPRE1Q15691 268 aaKnown RBP20.8■□□□□ 0.92
SSBP2-218ENST00000514493 C3orf20Q8ND61 904 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 MYLPFQ96A32 169 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 C18orf8Q96DM3 657 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 IGSF21Q96ID5 467 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 TMEM209Q96SK2 561 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 SLC9A7Q96T83 725 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 MED10Q9BTT4 135 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 SLC4A5Q9BY07 1137 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 DUSP16Q9BY84 665 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 MIS12Q9H081 205 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 SYNCQ9H7C4 482 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 MRPL47Q9HD33 250 aaKnown RBP20.8■□□□□ 0.92
SSBP2-218ENST00000514493 KRT82Q9NSB4 513 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 PARVAQ9NVD7 372 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 WDR35Q9P2L0 1181 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 AMFRQ9UKV5 643 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 DYNC1I1O14576 645 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 XPO1O14980 1071 aaKnown RBP20.8■□□□□ 0.92
SSBP2-218ENST00000514493 FAM200BP0CF97 657 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 PLA2G4AP47712 749 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 MRPL58Q14197 206 aaKnown RBP20.8■□□□□ 0.92
SSBP2-218ENST00000514493 ZNF280DQ6N043 979 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 PMF1Q6P1K2 205 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 DNAJC24Q6P3W2 148 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 PHLDB2Q86SQ0 1253 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 RNF168Q8IYW5 571 aaPredicted RBP20.8■□□□□ 0.92
SSBP2-218ENST00000514493 PSMB7Q99436 277 aa20.8■□□□□ 0.92
SSBP2-218ENST00000514493 LBHD1Q9BQE6 289 aaPredicted RBP20.8■□□□□ 0.92
SSBP2-218ENST00000514493 ZNF185O15231 689 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 SLC8A3P57103 927 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 CEP57Q86XR8 500 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 XYLT1Q86Y38 959 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 CREG2Q8IUH2 290 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 SLC39A11Q8N1S5 342 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 COLGALT1Q8NBJ5 622 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 COG1Q8WTW3 980 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 CAPZA3Q96KX2 299 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 ZCWPW1Q9H0M4 648 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 CYLDQ9NQC7 956 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 ST7Q9NRC1 585 aa20.79■□□□□ 0.92
SSBP2-218ENST00000514493 GBF1Q92538 1859 aa20.78■□□□□ 0.92
SSBP2-218ENST00000514493 CTAGE15A4D2H0 777 aa20.78■□□□□ 0.92
SSBP2-218ENST00000514493 E5RJQ4 531 aa20.78■□□□□ 0.92
SSBP2-218ENST00000514493 CTAGE8P0CG41 777 aa20.78■□□□□ 0.92
SSBP2-218ENST00000514493 CXCR5P32302 372 aa20.78■□□□□ 0.92
SSBP2-218ENST00000514493 MAGEA10P43363 369 aaPredicted RBP20.78■□□□□ 0.92
SSBP2-218ENST00000514493 RPL34P49207 117 aaKnown RBP20.78■□□□□ 0.92
SSBP2-218ENST00000514493 RGS7P49802 495 aa20.78■□□□□ 0.92
SSBP2-218ENST00000514493 ZNF268Q14587 947 aaPredicted RBP20.78■□□□□ 0.92
SSBP2-218ENST00000514493 CLEC20AQ6ZU45 233 aa20.78■□□□□ 0.92
SSBP2-218ENST00000514493 CTAGE6Q86UF2 777 aa20.78■□□□□ 0.92
SSBP2-218ENST00000514493 CTAGE4Q8IX94 777 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms