RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	RARB	P10826	455 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	ITGAM	P11215	1152 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	FPR1	P21462	350 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	ZFP36	P26651	326 aa	Known RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	KCNJ5	P48544	419 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	RPS16	P62249	146 aa	Known RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	CXADR	P78310	365 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	POU6F2	P78424	691 aa	Predicted RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	COL10A1	Q03692	680 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	CCDC93	Q567U6	631 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	C3orf38	Q5JPI3	329 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	KLHDC7A	Q5VTJ3	777 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	METRNL	Q641Q3	311 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	SYCE2	Q6PIF2	218 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	RFX8	Q6ZV50	586 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PCGF5	Q86SE9	256 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	MICU3	Q86XE3	530 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	TXLNB	Q8N3L3	684 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	CELF5	Q8N6W0	485 aa	Known RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	ZNF384	Q8TF68	577 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	MAML1	Q92585	1016 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	TNPO1	Q92973	898 aa	Known RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PHACTR3	Q96KR7	559 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	RMDN3	Q96TC7	470 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	P2RX7	Q99572	595 aa	Known RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	C1orf43	Q9BWL3	253 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PACSIN1	Q9BY11	444 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	BRD9	Q9H8M2	597 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	SMURF2	Q9HAU4	748 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	TMEM8A	Q9HCN3	771 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	A1CF	Q9NQ94	594 aa	Known RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	NECTIN3	Q9NQS3	549 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	JKAMP	Q9P055	326 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	GPR52	Q9Y2T5	361 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	MTO1	Q9Y2Z2	717 aa	Known RBP	4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PCDHGB3	Q9Y5G1	929 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	COL4A3	Q01955	1670 aa		4.05	□□□□□ -1.76
CALCOCO2-223	ENST00000514267		A0A087WWL8	130 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PRRT4	C9JH25	899 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	SYT5	O00445	386 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	INMT	O95050	263 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	CHEK2	O96017	543 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	DHRS4L1	P0CG22	281 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	MYL4	P12829	197 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	HDC	P19113	662 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	FGFR4	P22455	802 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	KLRC1	P26715	233 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PDIA3	P30101	505 aa	Known RBP	4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	CXCR5	P32302	372 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	ARL4C	P56559	192 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	OCA2	Q04671	838 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	EXOSC9	Q06265	439 aa	Known RBP	4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PIGF	Q07326	219 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	GRM1	Q13255	1194 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	TP53BP2	Q13625	1128 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	CSRP2	Q16527	193 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	NBPF8	Q3BBV2	869 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	SP5	Q6BEB4	398 aa	Predicted RBP	4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	DPY19L2P1	Q6NXN4	242 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	USP17L6P	Q6QN14	398 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	OLFML1	Q6UWY5	402 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	CLEC4G	Q6UXB4	293 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	ZNF365	Q70YC5	407 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	RNF44	Q7L0R7	432 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	KRT73	Q86Y46	540 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	IL17RE	Q8NFR9	667 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	STON2	Q8WXE9	905 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	RNF31	Q96EP0	1072 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PAGR1	Q9BTK6	254 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	DUSP26	Q9BV47	211 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	SIK2	Q9H0K1	926 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	GPR35	Q9HC97	309 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	SAGE1	Q9NXZ1	904 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	LRIT1	Q9P2V4	623 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	GJD2	Q9UKL4	321 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	SLC39A10	Q9ULF5	831 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PLEKHM1	Q9Y4G2	1056 aa		4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	LRRFIP2	Q9Y608	721 aa	Known RBP	4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PNPLA7	Q6ZV29	1317 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PRSS29P	A6NIE9	313 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	UNC119B	A6NIH7	251 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PYCARD-AS1	I3L0S3	204 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267		M0R3H8	397 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	NPC1	O15118	1278 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	LPXN	O60711	386 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	SOAT2	O75908	522 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	GJB1	P08034	283 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	IDE	P14735	1019 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	VAV2	P52735	878 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	NOMO3	P69849	1222 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	ZNF844	Q08AG5	666 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	TBX2	Q13207	712 aa	Predicted RBP	4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PRKG1	Q13976	671 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PTK2B	Q14289	1009 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	PFKFB4	Q16877	469 aa		4.03	□□□□□ -1.76
CALCOCO2-223	ENST00000514267	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms