RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 MFAP3LO75121 409 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 ATP2C2O75185 946 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 GLP2RO95838 553 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 CNPP09543 421 aaKnown RBP10.76□□□□□ -0.69
NEDD9-214ENST00000513989 ANXA13P27216 316 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 HNRNPH3P31942 346 aaKnown RBP10.76□□□□□ -0.69
NEDD9-214ENST00000513989 SSTR3P32745 418 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-214ENST00000513989 ALDH1A3P47895 512 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 CCDC173Q0VFZ6 552 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 ORC1Q13415 861 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 ADAM15Q13444 863 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 ARHGAP17Q68EM7 881 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 LCLAT1Q6UWP7 414 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 VSTM1Q6UX27 236 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 TRIM72Q6ZMU5 477 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 EP400NLQ6ZTU2 488 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 CCDC149Q6ZUS6 474 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 IRF2BP2Q7Z5L9 587 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 SLC47A2Q86VL8 602 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 PALB2Q86YC2 1186 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 TMTC1Q8IUR5 882 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 ADHFE1Q8IWW8 467 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 C12orf29Q8N999 325 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 ANKRD52Q8NB46 1076 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 MSANTD4Q8NCY6 345 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 OR10T2Q8NGX3 314 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 AUTS2Q8WXX7 1259 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 CCDC42Q96M95 316 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 KLHL5Q96PQ7 755 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 AGPAT1Q99943 283 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 RTP3Q9BQQ7 232 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 GPR88Q9GZN0 384 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 DPEP3Q9H4B8 488 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 DEF6Q9H4E7 631 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 ABHD10Q9NUJ1 306 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 PRKAG3Q9UGI9 489 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 AFF4Q9UHB7 1163 aaKnown RBP10.76□□□□□ -0.69
NEDD9-214ENST00000513989 AJAP1Q9UKB5 411 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-214ENST00000513989 CITO14578 2027 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 HIDE1A8MVS5 230 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 PRRG1O14668 218 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 TRIM66O15016 1216 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 ABLIM3O94929 683 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 GLUD1P00367 558 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 FAM200BP0CF97 657 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 SRGAP2BP0DMP2 458 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 ATF2P15336 505 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 RPL17P18621 184 aaKnown RBP10.75□□□□□ -0.69
NEDD9-214ENST00000513989 GRIK1P39086 918 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 PRKCIP41743 596 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 MAGEA11P43364 429 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 RPL10AP62906 217 aaKnown RBP10.75□□□□□ -0.69
NEDD9-214ENST00000513989 RBM10P98175 930 aaKnown RBP10.75□□□□□ -0.69
NEDD9-214ENST00000513989 CDK17Q00537 523 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 CDR2Q01850 454 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 ROR1Q01973 937 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 ADCY1Q08828 1119 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 PLD1Q13393 1074 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 MEA1Q16626 185 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 CFAP221Q4G0U5 840 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 TDRD12Q587J7 1177 aaKnown RBP10.75□□□□□ -0.69
NEDD9-214ENST00000513989 PPP1R26Q5T8A7 1209 aaPredicted RBP10.75□□□□□ -0.69
NEDD9-214ENST00000513989 CYP26C1Q6V0L0 522 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 CCDC186Q7Z3E2 898 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 LRRTM3Q86VH5 581 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 GLYCTKQ8IVS8 523 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 TMEM35BQ8NCS4 154 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 VN1R2Q8NFZ6 395 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 SLC2A14Q8TDB8 520 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 HDAC7Q8WUI4 952 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 SMARCD1Q96GM5 515 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 PCED1BQ96HM7 432 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 TWNKQ96RR1 684 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.75□□□□□ -0.69
NEDD9-214ENST00000513989 DUSP16Q9BY84 665 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 B3GNT5Q9BYG0 378 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 UBXN6Q9BZV1 441 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 ZNF518BQ9C0D4 1074 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 MIS12Q9H081 205 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 LHX5Q9H2C1 402 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 PLEKHA4Q9H4M7 779 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 IGFLR1Q9H665 355 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 HAUS4Q9H6D7 363 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 CRTAC1Q9NQ79 661 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 SEPT11Q9NVA2 429 aaKnown RBP10.75□□□□□ -0.69
NEDD9-214ENST00000513989 ABI2Q9NYB9 513 aaPredicted RBP10.75□□□□□ -0.69
NEDD9-214ENST00000513989 EHD2Q9NZN4 543 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 HMGXB4Q9UGU5 601 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 HCN4Q9Y3Q4 1203 aa10.75□□□□□ -0.69
NEDD9-214ENST00000513989 DENND4AQ7Z401 1863 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 C2orf16Q68DN1 1984 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 DCXO43602 365 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 AKR1B10O60218 316 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 AP1G2O75843 785 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 IPO7O95373 1038 aaKnown RBP10.74□□□□□ -0.69
NEDD9-214ENST00000513989 LSM8O95777 96 aaKnown RBP10.74□□□□□ -0.69
NEDD9-214ENST00000513989 OR4Q2P0C623 313 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 PNMA6AP0CW24 399 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-214ENST00000513989 SETSIPP0DME0 302 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms