RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 GPD2P43304 727 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 NOMO3P69849 1222 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 PLPP4Q5VZY2 271 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 TPGS2Q68CL5 300 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 RNF19BQ6ZMZ0 732 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 FAM35AQ86V20 835 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 PALB2Q86YC2 1186 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 SPATA2LQ8IUW3 424 aaPredicted RBP13.27□□□□□ -0.29
PDPN-210ENST00000513143 WDTC1Q8N5D0 677 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 TMEM35BQ8NCS4 154 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 ZNF461Q8TAF7 563 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 UBA3Q8TBC4 463 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 SPPL2BQ8TCT7 592 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 MICAL1Q8TDZ2 1067 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 SMARCD1Q96GM5 515 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 ZNF830Q96NB3 372 aaPredicted RBP13.27□□□□□ -0.29
PDPN-210ENST00000513143 KLHL5Q96PQ7 755 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 MED10Q9BTT4 135 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.27□□□□□ -0.29
PDPN-210ENST00000513143 DUSP16Q9BY84 665 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 ZNF576Q9H609 170 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 ABCB6Q9NP58 842 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 AFF4Q9UHB7 1163 aaKnown RBP13.27□□□□□ -0.29
PDPN-210ENST00000513143 NENFQ9UMX5 172 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 PCDHB5Q9Y5E4 795 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 EPN1Q9Y6I3 576 aaPredicted RBP13.27□□□□□ -0.29
PDPN-210ENST00000513143 ATP8B3O60423 1300 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 TRANK1O15050 2925 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 TMEM265A0A087WTH1 108 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 EIF3CLB5ME19 914 aaKnown RBP13.26□□□□□ -0.29
PDPN-210ENST00000513143 LPXNO60711 386 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 AP1G2O75843 785 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 NDUFA10O95299 355 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 VNN2O95498 520 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 ADH1AP07327 375 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 FAM200BP0CF97 657 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 SETSIPP0DME0 302 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 GZMAP12544 262 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 ATF2P15336 505 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 NPR3P17342 541 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 BDNFP23560 247 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 CA8P35219 290 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 MAGEA11P43364 429 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 CDR1P51861 262 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 BCAT1P54687 386 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 GFPT1Q06210 699 aaPredicted RBP13.26□□□□□ -0.29
PDPN-210ENST00000513143 BST2Q10589 180 aaKnown RBP13.26□□□□□ -0.29
PDPN-210ENST00000513143 MTF1Q14872 753 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 CLEC16AQ2KHT3 1053 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 VSTM1Q6UX27 236 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 PASD1Q8IV76 773 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 ATAD1Q8NBU5 361 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 GDPD5Q8WTR4 605 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 SLC35F5Q8WV83 523 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 SECISBP2LQ93073 1101 aaKnown RBP13.26□□□□□ -0.29
PDPN-210ENST00000513143 PGLYRP2Q96PD5 576 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 EIF3CQ99613 913 aaKnown RBP13.26□□□□□ -0.29
PDPN-210ENST00000513143 RHOBTB2Q9BYZ6 727 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 CSNK1G1Q9HCP0 422 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 KRT82Q9NSB4 513 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 SPTLC3Q9NUV7 552 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 SEPT11Q9NVA2 429 aaKnown RBP13.26□□□□□ -0.29
PDPN-210ENST00000513143 ABI2Q9NYB9 513 aaPredicted RBP13.26□□□□□ -0.29
PDPN-210ENST00000513143 HSFX1Q9UBD0 423 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 NAGPAQ9UK23 515 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 MAFFQ9ULX9 164 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 CEP83Q9Y592 693 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 PCDHGC5Q9Y5F6 944 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 PATJQ8NI35 1801 aa13.26□□□□□ -0.29
PDPN-210ENST00000513143 ZNF263O14978 683 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 XPO1O14980 1071 aaKnown RBP13.25□□□□□ -0.29
PDPN-210ENST00000513143 RTN2O75298 545 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 BEST1O76090 585 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 C1RP00736 705 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 HAPLN1P10915 354 aaPredicted RBP13.25□□□□□ -0.29
PDPN-210ENST00000513143 CYP2F1P24903 491 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 CACNA2D1P54289 1103 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 SLC8A3P57103 927 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 CENPCQ03188 943 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 PDE4CQ08493 712 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 ADCY1Q08828 1119 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 NAA35Q5VZE5 725 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 ACAD10Q6JQN1 1059 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 PPP1R2P3Q6NXS1 205 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 ALKBH5Q6P6C2 394 aaKnown RBP13.25□□□□□ -0.29
PDPN-210ENST00000513143 LILRA6Q6PI73 481 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 CLEC20AQ6ZU45 233 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 C1orf131Q8NDD1 294 aaKnown RBP13.25□□□□□ -0.29
PDPN-210ENST00000513143 ZMIZ2Q8NF64 920 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 STK32AQ8WU08 396 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 CPA5Q8WXQ8 436 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 SMOQ99835 787 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 UBXN6Q9BZV1 441 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 ISCUQ9H1K1 167 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 CRISPLD1Q9H336 500 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 TMEM30AQ9NV96 361 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 TAS2R14Q9NYV8 317 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 CYTH4Q9UIA0 394 aa13.25□□□□□ -0.29
PDPN-210ENST00000513143 GREB1Q4ZG55 1949 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms