RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 HMGB4Q8WW32 186 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 ZNF560Q96MR9 790 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 REEP2Q9BRK0 252 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 ASB7Q9H672 318 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 TMEM74BQ9NUR3 256 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 KCND2Q9NZV8 630 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 VWA3AA6NCI4 1184 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 ANKRD63C9JTQ0 380 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 HDCP19113 662 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 ARSHQ5FYA8 562 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 SLC39A4Q6P5W5 647 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 TMEM92Q6UXU6 159 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 SPATA2LQ8IUW3 424 aaPredicted RBP17.15■□□□□ 0.34
DDR1-269ENST00000512725 DEFB119Q8N690 84 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 TXNDC5Q8NBS9 432 aaKnown RBP17.15■□□□□ 0.34
DDR1-269ENST00000512725 SPRYD3Q8NCJ5 442 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 WHAMMQ8TF30 809 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 POLMQ9NP87 494 aaPredicted RBP17.15■□□□□ 0.34
DDR1-269ENST00000512725 ZDHHC4Q9NPG8 344 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 DDX43Q9NXZ2 648 aaKnown RBP17.15■□□□□ 0.34
DDR1-269ENST00000512725 AGO2Q9UKV8 859 aaKnown RBP17.15■□□□□ 0.34
DDR1-269ENST00000512725 C2CD2Q9Y426 696 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 DMXL2Q8TDJ6 3036 aa17.15■□□□□ 0.34
DDR1-269ENST00000512725 FASNP49327 2511 aaKnown RBP17.14■□□□□ 0.33
DDR1-269ENST00000512725 ADAMTS9Q9P2N4 1935 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 MYMKA6NI61 221 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 TISP43B9A030 160 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 TNFRSF10BO14763 440 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 SCAMP3O14828 347 aaKnown RBP17.14■□□□□ 0.33
DDR1-269ENST00000512725 TRAK2O60296 914 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 HUS1O60921 280 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 NOL4O94818 638 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 PIGRP01833 764 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 OPRD1P41143 372 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 HMGN5P82970 282 aaKnown RBP17.14■□□□□ 0.33
DDR1-269ENST00000512725 MYL7Q01449 175 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 LYSMD4Q5XG99 296 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 MCTP1Q6DN14 999 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
DDR1-269ENST00000512725 PARVGQ9HBI0 331 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 MBD1Q9UIS9 605 aaPredicted RBP17.14■□□□□ 0.33
DDR1-269ENST00000512725 GTF3C4Q9UKN8 822 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 ODF2LQ9ULJ1 636 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.33
DDR1-269ENST00000512725 HNRNPLP14866 589 aaKnown RBP eCLIP17.13■□□□□ 0.33
DDR1-269ENST00000512725 ITPKAP23677 461 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 POLR2BP30876 1174 aaKnown RBP17.13■□□□□ 0.33
DDR1-269ENST00000512725 P2RY2P41231 377 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 MRPS21P82921 87 aaKnown RBP17.13■□□□□ 0.33
DDR1-269ENST00000512725 TFAMQ00059 246 aaKnown RBP17.13■□□□□ 0.33
DDR1-269ENST00000512725 GFPT1Q06210 699 aaPredicted RBP17.13■□□□□ 0.33
DDR1-269ENST00000512725 BYSLQ13895 437 aaKnown RBP17.13■□□□□ 0.33
DDR1-269ENST00000512725 CCDC142Q17RM4 750 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 HYIQ5T013 277 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 SFTPA1Q8IWL2 248 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 PDCL2Q8N4E4 241 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 RASSF8Q8NHQ8 419 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 TRMT2BQ96GJ1 504 aaKnown RBP17.13■□□□□ 0.33
DDR1-269ENST00000512725 FNBP1Q96RU3 617 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.13■□□□□ 0.33
DDR1-269ENST00000512725 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 AGAP1Q9UPQ3 857 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 PKD1L2Q7Z442 2459 aa17.13■□□□□ 0.33
DDR1-269ENST00000512725 TCRBV21S2A2A0A5A6 115 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 H0Y626 953 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 SGK1O00141 431 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 TAF4O00268 1085 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 OPHN1O60890 802 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 TBCAO75347 108 aaKnown RBP17.12■□□□□ 0.33
DDR1-269ENST00000512725 TRIM16O95361 564 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 ABL1P00519 1130 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 APODP05090 189 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 PNPLA4P41247 253 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 SLC6A11P48066 632 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 FAM193AP78312 1265 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 KDSRQ06136 332 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 INTS6LQ5JSJ4 861 aaKnown RBP17.12■□□□□ 0.33
DDR1-269ENST00000512725 EOGTQ5NDL2 527 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 EMC10Q5UCC4 262 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 SLFN12LQ6IEE8 588 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 SLC23A3Q6PIS1 610 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 FILIP1Q7Z7B0 1213 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 OLIG1Q8TAK6 271 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 SPATA18Q8TC71 538 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 NOC3LQ8WTT2 800 aaKnown RBP17.12■□□□□ 0.33
DDR1-269ENST00000512725 POMGNT1Q8WZA1 660 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 PNKPQ96T60 521 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 ACBD6Q9BR61 282 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 CCSER1Q9C0I3 900 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 GCNT4Q9P109 453 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 SLC6A14Q9UN76 642 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 DSPP15924 2871 aaKnown RBP17.12■□□□□ 0.33
DDR1-269ENST00000512725 PI4KAP42356 2102 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 NBEAQ8NFP9 2946 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 GON4LQ3T8J9 2241 aa17.12■□□□□ 0.33
DDR1-269ENST00000512725 PCNX2A6NKB5 2137 aa17.11■□□□□ 0.33
DDR1-269ENST00000512725 LEFTY2O00292 366 aa17.11■□□□□ 0.33
DDR1-269ENST00000512725 ITGB3P05106 788 aa17.11■□□□□ 0.33
DDR1-269ENST00000512725 KRT19P08727 400 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms