RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ZFYVE19Q96K21 471 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 B3GNT5Q9BYG0 378 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 HOOK1Q9UJC3 728 aaKnown RBP17.58■□□□□ 0.4
DDX41-213ENST00000512027 CCL26Q9Y258 94 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 HELZP42694 1942 aaKnown RBP17.58■□□□□ 0.4
DDX41-213ENST00000512027 CACNA1HO95180 2353 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 DMDP11532 3685 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 PATJQ8NI35 1801 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 F8VP50 259 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 EPB41P11171 864 aaKnown RBP17.57■□□□□ 0.4
DDX41-213ENST00000512027 GLULP15104 373 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 UBXN2BQ14CS0 331 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 MAPRE1Q15691 268 aaKnown RBP17.57■□□□□ 0.4
DDX41-213ENST00000512027 KLHL10Q6JEL2 608 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 PHLDB3Q6NSJ2 640 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 ACOT1Q86TX2 421 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 PJA1Q8NG27 643 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 TTC8Q8TAM2 541 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 DEPDC1BQ8WUY9 529 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 TSG101Q99816 390 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 TRPC7Q9HCX4 862 aa17.57■□□□□ 0.4
DDX41-213ENST00000512027 MYO15AQ9UKN7 3530 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 DPYSL4O14531 572 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 FAM163BP0C2L3 166 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 NDST1P52848 882 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 PTPN5P54829 565 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 NOP14P78316 857 aaKnown RBP17.56■□□□□ 0.4
DDX41-213ENST00000512027 IFRD2Q12894 506 aaPredicted RBP17.56■□□□□ 0.4
DDX41-213ENST00000512027 DCAF17Q5H9S7 520 aaPredicted RBP17.56■□□□□ 0.4
DDX41-213ENST00000512027 VSTM1Q6UX27 236 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 FAM35AQ86V20 835 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 ZC3H3Q8IXZ2 948 aaKnown RBP17.56■□□□□ 0.4
DDX41-213ENST00000512027 YAF2Q8IY57 180 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 CCDC105Q8IYK2 499 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 CMTM8Q8IZV2 173 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 DTWD2Q8NBA8 298 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 RIN3Q8TB24 985 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 MRPS31Q92665 395 aaKnown RBP17.56■□□□□ 0.4
DDX41-213ENST00000512027 SEMA4DQ92854 862 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 DNASE1L2Q92874 299 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 TRMT2BQ96GJ1 504 aaKnown RBP17.56■□□□□ 0.4
DDX41-213ENST00000512027 MYRFLQ96LU7 910 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 TWNKQ96RR1 684 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 SLC22A12Q96S37 553 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 DDX23Q9BUQ8 820 aaKnown RBP17.56■□□□□ 0.4
DDX41-213ENST00000512027 TMEM8AQ9HCN3 771 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 DLGAP2Q9P1A6 1054 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 SIT1Q9Y3P8 196 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 MYO16Q9Y6X6 1858 aa17.56■□□□□ 0.4
DDX41-213ENST00000512027 KANSL1LA0AUZ9 987 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 PPP1R3GB7ZBB8 358 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 ARNTLO00327 626 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 ZNF263O14978 683 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 CCDC130P13994 396 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 CD58P19256 250 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 CCNE1P24864 410 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 TARSP26639 723 aaKnown RBP17.55■□□□□ 0.4
DDX41-213ENST00000512027 ANXA13P27216 316 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 SOX9P48436 509 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 MXI1P50539 228 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 PRKCQQ04759 706 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 MORC3Q14149 939 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 CAMK4Q16566 473 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 TCERG1LQ5VWI1 586 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 PAQR9Q6ZVX9 377 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 ELOA2Q8IYF1 753 aaPredicted RBP17.55■□□□□ 0.4
DDX41-213ENST00000512027 TTC16Q8NEE8 873 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 TAF4BQ92750 862 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 IRF7Q92985 503 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 USP13Q92995 863 aaPredicted RBP17.55■□□□□ 0.4
DDX41-213ENST00000512027 SHDQ96IW2 340 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 SPATA17Q96L03 361 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 CYP2S1Q96SQ9 504 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 KCNK16Q96T55 309 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 PRRX2Q99811 253 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 MED10Q9BTT4 135 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 BCO2Q9BYV7 579 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 LTB4R2Q9NPC1 389 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 FAM49BQ9NUQ9 324 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 CTNND2Q9UQB3 1225 aa17.55■□□□□ 0.4
DDX41-213ENST00000512027 C2orf78A6NCI8 922 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 PSMA7O14818 248 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 SLC16A3O15427 465 aaKnown RBP17.54■□□□□ 0.4
DDX41-213ENST00000512027 P4HA1P13674 534 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 AVPR1AP37288 418 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 UBE2HP62256 183 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 FKBP3Q00688 224 aaKnown RBP17.54■□□□□ 0.4
DDX41-213ENST00000512027 LRRC63Q05C16 580 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 TNK2Q07912 1038 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 FCHO2Q0JRZ9 810 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 CBWD6Q4V339 395 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 CBWD3Q5JTY5 395 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 CBWD5Q5RIA9 395 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 KRT39Q6A163 491 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 DENND5BQ6ZUT9 1274 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 C12orf29Q8N999 325 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 E2F7Q96AV8 911 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 DUSP9Q99956 384 aaKnown RBP17.54■□□□□ 0.4
DDX41-213ENST00000512027 IMPG2Q9BZV3 1241 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 ELOVL4Q9GZR5 314 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms