RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 EDRF1Q3B7T1 1238 aa19.89■□□□□ 0.77
UBE3D-207ENST00000509102 ZACNQ401N2 412 aa19.89■□□□□ 0.77
UBE3D-207ENST00000509102 B3GALNT2Q8NCR0 500 aa19.89■□□□□ 0.77
UBE3D-207ENST00000509102 SPATA17Q96L03 361 aa19.89■□□□□ 0.77
UBE3D-207ENST00000509102 TIGD1Q96MW7 591 aa19.89■□□□□ 0.77
UBE3D-207ENST00000509102 SLC46A2Q9BY10 475 aa19.89■□□□□ 0.77
UBE3D-207ENST00000509102 DNAI2Q9GZS0 605 aa19.89■□□□□ 0.77
UBE3D-207ENST00000509102 CETN3O15182 167 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 KINO60870 393 aaKnown RBP19.88■□□□□ 0.77
UBE3D-207ENST00000509102 AKAP3O75969 853 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 MLLT6P55198 1093 aaPredicted RBP19.88■□□□□ 0.77
UBE3D-207ENST00000509102 CCDC142Q17RM4 750 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 CC2D1AQ6P1N0 951 aaPredicted RBP19.88■□□□□ 0.77
UBE3D-207ENST00000509102 SCARA5Q6ZMJ2 495 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 DENND5BQ6ZUT9 1274 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 SV2AQ7L0J3 742 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 MON1AQ86VX9 555 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 GPIHBP1Q8IV16 184 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 C1orf210Q8IVY1 113 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 FAM3CQ92520 227 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 SMYD3Q9H7B4 428 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 C8orf33Q9H7E9 229 aaPredicted RBP19.88■□□□□ 0.77
UBE3D-207ENST00000509102 TRPC7Q9HCX4 862 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 SPATA6Q9NWH7 488 aaPredicted RBP19.88■□□□□ 0.77
UBE3D-207ENST00000509102 DLGAP2Q9P1A6 1054 aa19.88■□□□□ 0.77
UBE3D-207ENST00000509102 CIZ1Q9ULV3 898 aaPredicted RBP19.88■□□□□ 0.77
UBE3D-207ENST00000509102 TRAV19A0A0A6YYK7 116 aa19.87■□□□□ 0.77
UBE3D-207ENST00000509102 STX10O60499 249 aa19.87■□□□□ 0.77
UBE3D-207ENST00000509102 PRAMEF12O95522 483 aa19.87■□□□□ 0.77
UBE3D-207ENST00000509102 EPB41P11171 864 aaKnown RBP19.87■□□□□ 0.77
UBE3D-207ENST00000509102 STIM1Q13586 685 aa19.87■□□□□ 0.77
UBE3D-207ENST00000509102 ZNF658Q5TYW1 1059 aaPredicted RBP19.87■□□□□ 0.77
UBE3D-207ENST00000509102 TXNDC8Q6A555 127 aa19.87■□□□□ 0.77
UBE3D-207ENST00000509102 STKLD1Q8NE28 680 aa19.87■□□□□ 0.77
UBE3D-207ENST00000509102 RSPRY1Q96DX4 576 aa19.87■□□□□ 0.77
UBE3D-207ENST00000509102 TDP1Q9NUW8 608 aa19.87■□□□□ 0.77
UBE3D-207ENST00000509102 NDRG2Q9UN36 371 aaKnown RBP19.87■□□□□ 0.77
UBE3D-207ENST00000509102 NUP210Q8TEM1 1887 aaPredicted RBP19.87■□□□□ 0.77
UBE3D-207ENST00000509102 MIA3Q5JRA6 1907 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 LAMTOR5O43504 91 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 VNN1O95497 513 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 CKMP06732 381 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 USP17L7P0C7H9 530 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 TARSP26639 723 aaKnown RBP19.86■□□□□ 0.77
UBE3D-207ENST00000509102 NBL1P41271 181 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 RPS9P46781 194 aaKnown RBP19.86■□□□□ 0.77
UBE3D-207ENST00000509102 PPP3CCP48454 512 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 ZC3H14Q6PJT7 736 aaKnown RBP19.86■□□□□ 0.77
UBE3D-207ENST00000509102 TMEM150AQ86TG1 271 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 SMYD4Q8IYR2 804 aaPredicted RBP19.86■□□□□ 0.77
UBE3D-207ENST00000509102 ENGASEQ8NFI3 743 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 C8orf48Q96LL4 319 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 PHOX2BQ99453 314 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 MED10Q9BTT4 135 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 TRPM5Q9NZQ8 1165 aa19.86■□□□□ 0.77
UBE3D-207ENST00000509102 MTF2Q9Y483 593 aaPredicted RBP19.86■□□□□ 0.77
UBE3D-207ENST00000509102 NCANO14594 1321 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 F8VP50 259 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 LRRN2O75325 713 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 ASS1P00966 412 aaKnown RBP19.85■□□□□ 0.77
UBE3D-207ENST00000509102 HLA-DRAP01903 254 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 GTF2H1P32780 548 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 PPP1R2P41236 205 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 GCLMP48507 274 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 CDH8P55286 799 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 ZNF268Q14587 947 aaPredicted RBP19.85■□□□□ 0.77
UBE3D-207ENST00000509102 ZCWPW2Q504Y3 356 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 SLITRK1Q96PX8 696 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 IER2Q9BTL4 223 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 SMG9Q9H0W8 520 aaKnown RBP19.85■□□□□ 0.77
UBE3D-207ENST00000509102 DPEP3Q9H4B8 488 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 MMRN2Q9H8L6 949 aa19.85■□□□□ 0.77
UBE3D-207ENST00000509102 PROB1E7EW31 1015 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 ARNTLO00327 626 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 GFRA3O60609 400 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 TRIM49P0CI25 452 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 TRIM49CP0CI26 452 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 CCNE1P24864 410 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 PRCPP42785 496 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 RAP1GAPP47736 663 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 NOP14P78316 857 aaKnown RBP19.84■□□□□ 0.77
UBE3D-207ENST00000509102 AMPD2Q01433 879 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 LRRC32Q14392 662 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 PPP2R5DQ14738 602 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 ITPRIPL2Q3MIP1 535 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 COBLL1Q53SF7 1204 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 UNC93AQ86WB7 457 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 RALGPS2Q86X27 583 aaPredicted RBP19.84■□□□□ 0.77
UBE3D-207ENST00000509102 USP13Q92995 863 aaPredicted RBP19.84■□□□□ 0.77
UBE3D-207ENST00000509102 NKD2Q969F2 451 aaPredicted RBP19.84■□□□□ 0.77
UBE3D-207ENST00000509102 CLDN23Q96B33 292 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 ZFYVE19Q96K21 471 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 ZNF518BQ9C0D4 1074 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 TMEM8AQ9HCN3 771 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 PCDHA5Q9Y5H7 936 aa19.84■□□□□ 0.77
UBE3D-207ENST00000509102 TICRRQ7Z2Z1 1910 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 PSMA7O14818 248 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 RTN3O95197 1032 aaPredicted RBP19.83■□□□□ 0.77
UBE3D-207ENST00000509102 PFKLP17858 780 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 FKBP3Q00688 224 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms