RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CHST7Q9NS84 486 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 SEPT11Q9NVA2 429 aaKnown RBP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 ERVK-11Q9UQG0 969 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 CLASP2O75122 1294 aaKnown RBP10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 SIN3BO75182 1162 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 FGRP09769 529 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 HSD17B4P51659 736 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 KPNA1P52294 538 aaPredicted RBP10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 CLEC16AQ2KHT3 1053 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 RARS2Q5T160 578 aaKnown RBP10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 PGM2L1Q6PCE3 622 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 KCNK18Q7Z418 384 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 NEK8Q86SG6 692 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 BPHLQ86WA6 291 aaPredicted RBP10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 TMEM126BQ8IUX1 230 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 LRRC49Q8IUZ0 686 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 PQLC1Q8N2U9 271 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 TTC39CQ8N584 583 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 PCYOX1LQ8NBM8 494 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 RNF169Q8NCN4 708 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 OTUD5Q96G74 571 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 CCDC138Q96M89 665 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 NLRP4Q96MN2 994 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 SLC2A11Q9BYW1 496 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 DCLK3Q9C098 648 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 CEP44Q9C0F1 390 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 WWP1Q9H0M0 922 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 EHD1Q9H4M9 534 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 OLFML3Q9NRN5 406 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 SLC17A7Q9P2U7 560 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 PSMD13Q9UNM6 376 aa10.46□□□□□ -0.73
PDGFRA-207ENST00000509092 MEI4A8MW99 385 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 SMIM22K7EJ46 135 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 INHBBP09529 407 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 DHRS4L1P0CG22 281 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 GPC5P78333 572 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 CDK18Q07002 472 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 CD300CQ08708 224 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 DRAP1Q14919 205 aaPredicted RBP10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 HERC4Q5GLZ8 1057 aaPredicted RBP10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 EGFLAMQ63HQ2 1017 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 OGFOD2Q6N063 350 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 LDHAL6AQ6ZMR3 332 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 GPR180Q86V85 440 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 KBTBD6Q86V97 674 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 CCDC89Q8N998 374 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 BANPQ8N9N5 519 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 PLA2G12BQ9BX93 195 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 LRRC4BQ9NT99 713 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 RABGEF1Q9UJ41 708 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 SCINQ9Y6U3 715 aa10.46□□□□□ -0.74
PDGFRA-207ENST00000509092 NRAPQ86VF7 1730 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 PRR5-ARHGAP8B1AHC4 643 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 TRPA1O75762 1119 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 APOEP02649 317 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 C8BP07358 591 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 ARHGAP8P85298 464 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 RGS21Q2M5E4 152 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 MIGA1Q8NAN2 632 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 SNX29Q8TEQ0 813 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 SDR42E1Q8WUS8 393 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 PSPC1Q8WXF1 523 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 RAB34Q9BZG1 259 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 ALG13Q9NP73 1137 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 BMP2KQ9NSY1 1161 aaPredicted RBP10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 BARHL2Q9NY43 387 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 RBMX2Q9Y388 322 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 PSME4Q14997 1843 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 KLF11O14901 512 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 MYCLP1P12525 358 aaPredicted RBP10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 AOC1P19801 751 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 RCVRNP35243 200 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 IL6STP40189 918 aaPredicted RBP10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 MXI1P50539 228 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 EPHB1P54762 984 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 SLC25A3Q00325 362 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 HSF5Q4G112 596 aaPredicted RBP10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 EFHC2Q5JST6 749 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 KRT79Q5XKE5 535 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 PPP2R2DQ66LE6 453 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 HEATR3Q7Z4Q2 680 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 TICAM1Q8IUC6 712 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 GALNT4Q8N4A0 578 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 TBC1D15Q8TC07 691 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 ATG4AQ8WYN0 398 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 ISOC1Q96CN7 298 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 C8orf37Q96NL8 207 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 MTMR9Q96QG7 549 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 CSRNP1Q96S65 589 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 NUP85Q9BW27 656 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 VPS37BQ9H9H4 285 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 FETUBQ9UGM5 382 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 STRIP2Q9ULQ0 834 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 GNEQ9Y223 722 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 POMPQ9Y244 141 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 FRMD4BQ9Y2L6 1034 aa10.45□□□□□ -0.74
PDGFRA-207ENST00000509092 SLIT2O94813 1529 aa10.44□□□□□ -0.74
PDGFRA-207ENST00000509092 ROBO3Q96MS0 1386 aa10.44□□□□□ -0.74
PDGFRA-207ENST00000509092 UBR2Q8IWV8 1755 aa10.44□□□□□ -0.74
PDGFRA-207ENST00000509092 NOTOA8MTQ0 251 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms