RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TMPRSS6Q8IU80 811 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 TMTC2Q8N394 836 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 FANCBQ8NB91 859 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 IL31RAQ8NI17 732 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 CTCFLQ8NI51 663 aaPredicted RBP5.21□□□□□ -1.58
NUP54-206ENST00000508465 TRIM43Q96BQ3 446 aaPredicted RBP5.21□□□□□ -1.58
NUP54-206ENST00000508465 JAKMIP1Q96N16 626 aaKnown RBP5.21□□□□□ -1.58
NUP54-206ENST00000508465 AGAP2Q99490 1192 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 AARSD1Q9BTE6 412 aaKnown RBP5.21□□□□□ -1.58
NUP54-206ENST00000508465 TRPV6Q9H1D0 765 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 OR10A2Q9H208 303 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 RIOX1Q9H6W3 641 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 IPPKQ9H8X2 491 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 IGSF5Q9NSI5 407 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 GALNT8Q9NY28 637 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 CEP72Q9P209 647 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 ADD3Q9UEY8 706 aaKnown RBP5.21□□□□□ -1.58
NUP54-206ENST00000508465 R3HCC1Q9Y3T6 440 aaKnown RBP5.21□□□□□ -1.58
NUP54-206ENST00000508465 RBBP6Q7Z6E9 1792 aaKnown RBP5.21□□□□□ -1.58
NUP54-206ENST00000508465 WDR19Q8NEZ3 1342 aa5.21□□□□□ -1.58
NUP54-206ENST00000508465 SZT2Q5T011 3432 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 A0A0C4DFX4 3053 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 MCM3APO60318 1980 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 PLXNA1Q9UIW2 1896 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 KLF18A0A0U1RQI7 1052 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 GCOM1H8Y6P7 765 aaPredicted RBP5.2□□□□□ -1.58
NUP54-206ENST00000508465 ARIH2O95376 493 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 MYL3P08590 195 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 POLR2MP0CAP2 368 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 TXNP10599 105 aaKnown RBP5.2□□□□□ -1.58
NUP54-206ENST00000508465 FGFR1P11362 822 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 KIF5BP33176 963 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 HSPA4P34932 840 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 GJA4P35212 333 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 ADCY8P40145 1251 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 LIFRP42702 1097 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 HSD17B4P51659 736 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 DUSP28Q4G0W2 176 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 USP17L6PQ6QN14 398 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 LARP4Q71RC2 724 aaKnown RBP eCLIP5.2□□□□□ -1.58
NUP54-206ENST00000508465 ZNF627Q7L945 461 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 TLK2Q86UE8 772 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 MICU3Q86XE3 530 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 MCF2L2Q86YR7 1114 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 OR6J1Q8NGC5 347 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 MORC4Q8TE76 937 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 NSUN6Q8TEA1 469 aaKnown RBP5.2□□□□□ -1.58
NUP54-206ENST00000508465 CFHR4Q92496 578 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 BADQ92934 168 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 RRP36Q96EU6 259 aaKnown RBP5.2□□□□□ -1.58
NUP54-206ENST00000508465 GDF15Q99988 308 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 LBHD1Q9BQE6 289 aaPredicted RBP5.2□□□□□ -1.58
NUP54-206ENST00000508465 TTPALQ9BTX7 342 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 UPF3AQ9H1J1 476 aaKnown RBP5.2□□□□□ -1.58
NUP54-206ENST00000508465 SPC25Q9HBM1 224 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 VTA1Q9NP79 307 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 PXMP2Q9NR77 195 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 SLC2A4RGQ9NR83 387 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 PNMA2Q9UL42 364 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 TNFRSF18Q9Y5U5 241 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 GRIN2DO15399 1336 aa5.2□□□□□ -1.58
NUP54-206ENST00000508465 LAMA4Q16363 1823 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 ZNF236Q9UL36 1845 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 PMS2P1A4D2B8 440 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 ARVCFO00192 962 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 ADAMTS3O15072 1205 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 ZBTB43O43298 467 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 EIF3JO75822 258 aaKnown RBP5.19□□□□□ -1.58
NUP54-206ENST00000508465 REC8O95072 547 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 CALM1P0DP23 149 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 CALM2P0DP24 149 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 CALM3P0DP25 149 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 CASTP20810 708 aaKnown RBP5.19□□□□□ -1.58
NUP54-206ENST00000508465 RPS6KB1P23443 525 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 EDNRBP24530 442 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 ITGB8P26012 769 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 CYP2C18P33260 490 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 ETFBP38117 255 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 MRE11P49959 708 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 GNAQP50148 359 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 CDK7P50613 346 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 CCT2P78371 535 aaKnown RBP5.19□□□□□ -1.58
NUP54-206ENST00000508465 IL13RA1P78552 427 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 SP2Q02086 613 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 IFRD2Q12894 506 aaPredicted RBP5.19□□□□□ -1.58
NUP54-206ENST00000508465 ITGA7Q13683 1181 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 KRT32Q14532 448 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 PCOLCEQ15113 449 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 STXBP2Q15833 593 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 UBE2SQ16763 222 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 CCDC62Q6P9F0 684 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 APOA5Q6Q788 366 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 BLOC1S2Q6QNY1 142 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 ARHGAP36Q6ZRI8 547 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 TMTC3Q6ZXV5 915 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 HEATR3Q7Z4Q2 680 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 FILIP1Q7Z7B0 1213 aa5.19□□□□□ -1.58
NUP54-206ENST00000508465 PCSK9Q8NBP7 692 aaKnown RBP5.19□□□□□ -1.58
NUP54-206ENST00000508465 SH3RF2Q8TEC5 729 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms