RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 VAV2P52735 878 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CREB5Q02930 508 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 GRB10Q13322 594 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SLC12A1Q13621 1099 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 THOC5Q13769 683 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 MFSD4BQ5TF39 518 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 FAXCQ5TGI0 409 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SPATA1Q5VX52 437 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ANKRD54Q6NXT1 300 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 C16orf59Q7L2K0 433 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NIPA1Q7RTP0 329 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 DEPDC4Q8N2C3 294 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ATP6V0D2Q8N8Y2 350 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ST13P5Q8NFI4 369 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SUSD6Q92537 303 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 HPDLQ96IR7 371 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 MAP3K14Q99558 947 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TRIM54Q9BYV2 358 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TSGA10Q9BZW7 698 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ADAM7Q9H2U9 754 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 RNF19AQ9NV58 838 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 DCTN4Q9UJW0 460 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NAGPAQ9UK23 515 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF510Q9Y2H8 683 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 I3L4J1 428 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 MAGEC1O60732 1142 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NFATC1O95644 943 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CYP21A2P08686 494 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 HNF1BP35680 557 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SH3BGRP55822 239 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TMEM95Q3KNT9 176 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CCDC92Q53HC0 331 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 KCNT1Q5JUK3 1230 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ZBTB41Q5SVQ8 909 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ANGPTL8Q6UXH0 198 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 GBP6Q6ZN66 633 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 RD3Q7Z3Z2 195 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CDR2LQ86X02 465 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CD302Q8IX05 232 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CCDC13Q8IYE1 715 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 DCUN1D1Q96GG9 259 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NT5C1BQ96P26 610 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 PBX4Q9BYU1 374 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 C8orf33Q9H7E9 229 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 OLFML3Q9NRN5 406 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CHCHD3Q9NX63 227 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 BARX2Q9UMQ3 279 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SUFUQ9UMX1 484 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 KIAA1217Q5T5P2 1943 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SSC5DA1L4H1 1573 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CTAGE9A4FU28 777 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 MSH4O15457 936 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 EXTL3O43909 919 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 GPC4O75487 556 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 DDX5P17844 614 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CCNCP24863 283 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SREBF1P36956 1147 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 GARSP41250 739 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 IL1RL1Q01638 556 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 KRT72Q14CN4 511 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 PON2Q15165 354 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 PCBP1Q15365 356 aaKnown RBP eCLIP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NXNQ6DKJ4 435 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 FUT10Q6P4F1 479 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 KCNT2Q6UVM3 1135 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SPATA18Q8TC71 538 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 HMGB4Q8WW32 186 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TEPSINQ96N21 525 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NUDCD1Q96RS6 583 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 MYCBPQ99417 103 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NEUROG2Q9H2A3 272 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SENP2Q9HC62 589 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NLRC4Q9NPP4 1024 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 PAK6Q9NQU5 681 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ARMCX3Q9UH62 379 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 BRWD1Q9NSI6 2320 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 DOPEY2Q9Y3R5 2298 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 F5H5T6 163 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 SMIM22K7EJ46 135 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 KIAA0355O15063 1070 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 BUB1O43683 1085 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 GCKP35557 465 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 LIFRP42702 1097 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 GUCA1AP43080 201 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 RAP1GAPP47736 663 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 TFF2Q03403 129 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CCINQ13939 588 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ARHGEF7Q14155 803 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 RRP1BQ14684 758 aaKnown RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 PRSS55Q6UWB4 352 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 BZW1Q7L1Q6 419 aaKnown RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 DSG4Q86SJ6 1040 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 NKD2Q969F2 451 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 C16orf45Q96MC5 204 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 KRT12Q99456 494 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 UBE2TQ9NPD8 197 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 SMYD2Q9NRG4 433 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 UTP11Q9Y3A2 253 aaKnown RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms