RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 C18orf25Q96B23 403 aaPredicted RBP18.57■□□□□ 0.56
SFXN1-208ENST00000507823 CALCOCO1Q9P1Z2 691 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 SNX9Q9Y5X1 595 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 LRRD1A4D1F6 860 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 DUSP11O75319 330 aaKnown RBP18.57■□□□□ 0.56
SFXN1-208ENST00000507823 AKR1A1P14550 325 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 KDELR1P24390 212 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 ZNF200P98182 395 aaPredicted RBP18.57■□□□□ 0.56
SFXN1-208ENST00000507823 BEX3Q00994 111 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 IFFO1Q0D2I5 559 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 HIBCHQ6NVY1 386 aaPredicted RBP18.57■□□□□ 0.56
SFXN1-208ENST00000507823 TMEM110Q86TL2 294 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 CNPY3Q9BT09 278 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 ROPN1BQ9BZX4 212 aaPredicted RBP18.57■□□□□ 0.56
SFXN1-208ENST00000507823 ROPN1Q9HAT0 212 aaPredicted RBP18.57■□□□□ 0.56
SFXN1-208ENST00000507823 SMIM28A0A1B0GU29 152 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 FAM155AB1AL88 458 aaPredicted RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 ADCY8P40145 1251 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 MDH1P40925 334 aaKnown RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 RPL34P49207 117 aaKnown RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 SOWAHAQ2M3V2 549 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 GOLGA7BQ2TAP0 167 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 TAF2Q6P1X5 1199 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 TTC30AQ86WT1 665 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 EMC1Q8N766 993 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 SLC35F5Q8WV83 523 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 ASNSD1Q9NWL6 643 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 ANAPC5Q9UJX4 755 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 PIN4Q9Y237 131 aaKnown RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 XPOTO43592 962 aaKnown RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 TRUB2O95900 331 aaKnown RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 CHKAP35790 457 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 PNPLA4P41247 253 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 DNAJC21Q5F1R6 531 aaKnown RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 PPP1R26Q5T8A7 1209 aaPredicted RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 TRNP1Q6NT89 227 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 CRYBG2Q8N1P7 616 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 C12orf29Q8N999 325 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 PPP1R13LQ8WUF5 828 aa18.56■□□□□ 0.56
SFXN1-208ENST00000507823 TRIM6Q9C030 488 aaPredicted RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 CDC42EP4Q9H3Q1 356 aaKnown RBP18.56■□□□□ 0.56
SFXN1-208ENST00000507823 TNPO2O14787 897 aaKnown RBP18.55■□□□□ 0.56
SFXN1-208ENST00000507823 GPD1P21695 349 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 CTGFP29279 349 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 MIPP30301 263 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 GJA9P57773 515 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 C6orf118Q5T5N4 469 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 UBAP2Q5T6F2 1119 aaKnown RBP18.55■□□□□ 0.56
SFXN1-208ENST00000507823 FAM102AQ5T9C2 384 aaPredicted RBP18.55■□□□□ 0.56
SFXN1-208ENST00000507823 KAZNQ674X7 775 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 MFSD5Q6N075 450 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 FAM183BPQ6ZVS7 135 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 CYP4V2Q6ZWL3 525 aaPredicted RBP18.55■□□□□ 0.56
SFXN1-208ENST00000507823 TTC13Q8NBP0 860 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 TRPV1Q8NER1 839 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 UPF3AQ9H1J1 476 aaKnown RBP18.55■□□□□ 0.56
SFXN1-208ENST00000507823 E5RJQ4 531 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 CAND2O75155 1236 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 ATP1A2P50993 1020 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 ARSEP51690 589 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 PPP2R2AP63151 447 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 CCDC142Q17RM4 750 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 FBXO47Q5MNV8 452 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 OLFML1Q6UWY5 402 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 CEP128Q6ZU80 1094 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 SMG8Q8ND04 991 aaKnown RBP18.55■□□□□ 0.56
SFXN1-208ENST00000507823 KBTBD7Q8WVZ9 684 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 ZNF560Q96MR9 790 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 FAM118BQ9BPY3 351 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 ADAM7Q9H2U9 754 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 CYLDQ9NQC7 956 aa18.55■□□□□ 0.56
SFXN1-208ENST00000507823 NOVA2Q9UNW9 492 aaKnown RBP18.55■□□□□ 0.56
SFXN1-208ENST00000507823 TCEA3O75764 348 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 RNF8O76064 485 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 FAM163BP0C2L3 166 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 SCNN1AP37088 669 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 TRIP13Q15645 432 aaPredicted RBP18.54■□□□□ 0.56
SFXN1-208ENST00000507823 ZDHHC17Q8IUH5 632 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 DNALI1O14645 258 aaPredicted RBP18.54■□□□□ 0.56
SFXN1-208ENST00000507823 NDC80O14777 642 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 TTC4O95801 387 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 AKAP5P24588 427 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 CRHR2Q13324 411 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 ODF2Q5BJF6 829 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 GLRA4Q5JXX5 417 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 IZUMO3Q5VZ72 239 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 PMF1Q6P1K2 205 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 ARCQ7LC44 396 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 ACOT1Q86TX2 421 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 KHSRPQ92945 711 aaKnown RBP eCLIP18.54■□□□□ 0.568e-8■■■□□ 16.2
SFXN1-208ENST00000507823 ACSF2Q96CM8 615 aaPredicted RBP18.54■□□□□ 0.56
SFXN1-208ENST00000507823 PCDH9Q9HC56 1237 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 CWC15Q9P013 229 aaKnown RBP18.54■□□□□ 0.56
SFXN1-208ENST00000507823 USP18Q9UMW8 372 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 IPPQ9Y573 584 aa18.54■□□□□ 0.56
SFXN1-208ENST00000507823 CYBAP13498 195 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 LRPAP1P30533 357 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 LSP1P33241 339 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 ZFYVE27Q5T4F4 411 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 ZCCHC9Q8N567 271 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms