RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-204	ENST00000507761	ERC2	O15083	957 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	GRP	P07492	148 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	DLD	P09622	509 aa	Known RBP	4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	VIPR2	P41587	438 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	KCNJ5	P48544	419 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	FOXG1	P55316	489 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	SOX8	P57073	446 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	EVA1C	P58658	441 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	NKX6-1	P78426	367 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	AMPD3	Q01432	767 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	SATB1	Q01826	763 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	RABEP1	Q15276	862 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	CERKL	Q49MI3	558 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	KIRREL2	Q6UWL6	708 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	GALNT4	Q8N4A0	578 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	PRSS3P2	Q8NHM4	247 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	SLC35A4	Q96G79	324 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	SMAD5	Q99717	465 aa	Known RBP	4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	SHOC2	Q9UQ13	582 aa		4.62	□□□□□ -1.67
LINC01088-204	ENST00000507761	EXOC3	O60645	756 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	BCAR3	O75815	825 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	USP1	O94782	785 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	CHRM5	P08912	532 aa	Predicted RBP	4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	POLG	P54098	1239 aa	Predicted RBP	4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	TMEM240	Q5SV17	173 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	FCRL6	Q6DN72	434 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	CATIP	Q7Z7H3	387 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	TERB1	Q8NA31	727 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	THAP7	Q9BT49	309 aa	Predicted RBP	4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	ASPSCR1	Q9BZE9	553 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	SARS2	Q9NP81	518 aa	Known RBP	4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	XPR1	Q9UBH6	696 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	GABRQ	Q9UN88	632 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761	SBNO2	Q9Y2G9	1366 aa		4.61	□□□□□ -1.67
LINC01088-204	ENST00000507761		E5RJQ4	531 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	UBE2Q2L	H0YL09	131 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	PDE8B	O95263	885 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	IL33	O95760	270 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	LRPAP1	P30533	357 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	PDE6C	P51160	858 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	ZNF260	Q3ZCT1	412 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	KHDC1L	Q5JSQ8	128 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	L1TD1	Q5T7N2	865 aa	Known RBP	4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	SOCS4	Q8WXH5	440 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	MTFMT	Q96DP5	389 aa	Known RBP	4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	CDK5RAP3	Q96JB5	506 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	LENG8	Q96PV6	779 aa	Predicted RBP	4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	SNX18	Q96RF0	628 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	GTPBP4	Q9BZE4	634 aa	Known RBP	4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	PCDHA6	Q9UN73	950 aa		4.6	□□□□□ -1.67
LINC01088-204	ENST00000507761	hCG_1984214	I3L0E3	225 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	INSIG1	O15503	277 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	PRKCB	P05771	671 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	CYP2A6	P11509	494 aa	Predicted RBP	4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	CYP2C9	P11712	490 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761		Q4G0T1	1027 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	DEPDC1	Q5TB30	811 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	SERPINA13P	Q6UXR4	307 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	SLC15A3	Q8IY34	581 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	NANOGP1	Q8N7R0	232 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	PIGO	Q8TEQ8	1089 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	OSCP1	Q8WVF1	389 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	HSPBAP1	Q96EW2	488 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	MVB12A	Q96EY5	273 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	FAM118B	Q9BPY3	351 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	DPCD	Q9BVM2	203 aa	Predicted RBP	4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	KLHL13	Q9P2N7	655 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	MRPS17	Q9Y2R5	130 aa	Known RBP	4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	TMX2	Q9Y320	296 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	AFG3L2	Q9Y4W6	797 aa		4.59	□□□□□ -1.67
LINC01088-204	ENST00000507761	SOCS2	O14508	198 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	CSF1R	P07333	972 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	ATP5F1	P24539	256 aa	Predicted RBP	4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	AKAP5	P24588	427 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	IL1R2	P27930	398 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	RENBP	P51606	427 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	MYO1E	Q12965	1108 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	MRPL10	Q7Z7H8	261 aa	Known RBP	4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	BRIP1	Q9BX63	1249 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	CIPC	Q9C0C6	399 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	CXorf36	Q9H7Y0	433 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	TFCP2L1	Q9NZI6	479 aa		4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	SCAF8	Q9UPN6	1271 aa	Known RBP	4.58	□□□□□ -1.68
LINC01088-204	ENST00000507761	MYMK	A6NI61	221 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	MYO1C	O00159	1063 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	FCHO1	O14526	889 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	FGB	P02675	491 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	TH	P07101	528 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	SNHG28	P0DPA3	235 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	XRCC6	P12956	609 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	VCAM1	P19320	739 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	UCP3	P55916	312 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	WNT3	P56703	355 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	RAPGEF1	Q13905	1077 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	LRRC41	Q15345	812 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	ZNF813	Q6ZN06	617 aa		4.57	□□□□□ -1.68
LINC01088-204	ENST00000507761	WASF1	Q92558	559 aa		4.57	□□□□□ -1.68

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