RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 PLA2G4BP0C869 781 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 EEF2P13639 858 aaKnown RBP13.9□□□□□ -0.18
LETM1-203ENST00000505551 FOSL1P15407 271 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 PEX2P28328 305 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 CASP4P49662 377 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 ZCCHC9Q8N567 271 aaKnown RBP13.9□□□□□ -0.18
LETM1-203ENST00000505551 ATG4AQ8WYN0 398 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 THTPAQ9BU02 230 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 PPCSQ9HAB8 311 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.9□□□□□ -0.18
LETM1-203ENST00000505551 ADAMTS6Q9UKP5 1117 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 KDM3AQ9Y4C1 1321 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 E9PMD0 336 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 SPOPO43791 374 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 NR3C1P04150 777 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 JAG1P78504 1218 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 PLCB3Q01970 1234 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 IKQ13123 557 aaPredicted RBP13.89□□□□□ -0.19
LETM1-203ENST00000505551 BCL2A1Q16548 175 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 LRRC36Q1X8D7 754 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 STRIP1Q5VSL9 837 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 IZUMO3Q5VZ72 239 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 TMC7Q7Z402 723 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 GDPD5Q8WTR4 605 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 DCLK3Q9C098 648 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 POLIQ9UNA4 740 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.89□□□□□ -0.19
LETM1-203ENST00000505551 ESYT2A0FGR8 921 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 WDR91A4D1P6 747 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 PEX1O43933 1283 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 IL1BP01584 269 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 CD48P09326 243 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 PLS3P13797 630 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 PFKPQ01813 784 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 RELAQ04206 551 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 FOLH1Q04609 750 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 NCOA4Q13772 614 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 SLC25A41Q8N5S1 370 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 ZDHHC15Q96MV8 337 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 GRIP2Q9C0E4 1043 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 SLC24A2Q9UI40 661 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 LZTS1Q9Y250 596 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 SLX4Q8IY92 1834 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 ASTN1O14525 1302 aa13.89□□□□□ -0.19
LETM1-203ENST00000505551 CASQ2O14958 399 aaPredicted RBP13.88□□□□□ -0.19
LETM1-203ENST00000505551 DENRO43583 198 aaKnown RBP13.88□□□□□ -0.19
LETM1-203ENST00000505551 ENO1P06733 434 aaKnown RBP13.88□□□□□ -0.19
LETM1-203ENST00000505551 COL6A2P12110 1019 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 KRT4P19013 534 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 PCNX4Q63HM2 1172 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 DHRS4L2Q6PKH6 230 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 PLPP6Q8IY26 295 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 FAM186BQ8IYM0 893 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 SLC20A1Q8WUM9 679 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 PRPF31Q8WWY3 499 aaKnown RBP13.88□□□□□ -0.19
LETM1-203ENST00000505551 CAMKK2Q96RR4 588 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 PSMC3IPQ9P2W1 217 aaPredicted RBP13.88□□□□□ -0.19
LETM1-203ENST00000505551 CDK5RAP2Q96SN8 1893 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L15C9J2P7 530 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L13C9JLJ4 530 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L11C9JVI0 530 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L18D6R9N7 530 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L22D6RA61 530 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L17D6RBQ6 530 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L19D6RCP7 530 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L20D6RJB6 530 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 TM9SF1O15321 606 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
LETM1-203ENST00000505551 MYL2P10916 166 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 COG7P83436 770 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 ZNF543Q08ER8 600 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L24Q0WX57 530 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 APOFQ13790 326 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 CCDC142Q17RM4 750 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP41Q3LFD5 358 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 ARSHQ5FYA8 562 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 USP17L6PQ6QN14 398 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 ZNF410Q86VK4 478 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 DCLK2Q8N568 766 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 ERMNQ8TAM6 284 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 PYDC1Q8WXC3 89 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 VPS50Q96JG6 964 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 PHF12Q96QT6 1004 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 RIOX1Q9H6W3 641 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 ZNF696Q9H7X3 374 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 THEGQ9P2T0 379 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 IP6K2Q9UHH9 426 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 TAGLN3Q9UI15 199 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 HEY1Q9Y5J3 304 aa13.88□□□□□ -0.19
LETM1-203ENST00000505551 C2orf71A6NGG8 1288 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 SPECC1L-ADORA2AF8WAN1 911 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 TXNDC9O14530 226 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 ADCY3O60266 1144 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 PRKD1Q15139 912 aaPredicted RBP13.87□□□□□ -0.19
LETM1-203ENST00000505551 TLR1Q15399 786 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 BMT2Q1RMZ1 405 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 ZNF362Q5T0B9 420 aaPredicted RBP13.87□□□□□ -0.19
LETM1-203ENST00000505551 STYK1Q6J9G0 422 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 ALYREFQ86V81 257 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms