RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 F8W735 103 aaPredicted RBP6.12□□□□□ -1.43
SNX25-203ENST00000504959 WNT10BO00744 389 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 KCNK3O14649 394 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 NKRFO15226 690 aaKnown RBP eCLIP6.12□□□□□ -1.43
SNX25-203ENST00000504959 POLR3GO15318 223 aaPredicted RBP6.12□□□□□ -1.43
SNX25-203ENST00000504959 AP1G1O43747 822 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 TACC1O75410 805 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 ERLIN1O75477 346 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 PLEKP08567 350 aaPredicted RBP6.12□□□□□ -1.43
SNX25-203ENST00000504959 GAP43P17677 238 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 KCNA3P22001 575 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 HNRNPH3P31942 346 aaKnown RBP6.12□□□□□ -1.43
SNX25-203ENST00000504959 PRELPP51888 382 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 KIF11P52732 1056 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 VAV2P52735 878 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 CXCL9Q07325 125 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 TNFAIP1Q13829 316 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 SMC1AQ14683 1233 aaKnown RBP6.12□□□□□ -1.43
SNX25-203ENST00000504959 ACAP2Q15057 778 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 SLC9C1Q4G0N8 1177 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 CEP55Q53EZ4 464 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 SGO2Q562F6 1265 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 PDXDC1Q6P996 788 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 SEZ6L2Q6UXD5 910 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 C16orf59Q7L2K0 433 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 MYCT1Q8N699 235 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 CAGE1Q8TC20 777 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 PIGOQ8TEQ8 1089 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 DYDC2Q96IM9 177 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 ALS2CR12Q96Q35 445 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 KCNJ15Q99712 375 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 TEKT3Q9BXF9 490 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 FUT8Q9BYC5 575 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.12□□□□□ -1.43
SNX25-203ENST00000504959 WDR11Q9BZH6 1224 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 NMRK2Q9NPI5 230 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 NLRC4Q9NPP4 1024 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 JADE2Q9NQC1 790 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 GPATCH2Q9NW75 528 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 RGL1Q9NZL6 768 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 CEP72Q9P209 647 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 ARMCX3Q9UH62 379 aaPredicted RBP6.12□□□□□ -1.43
SNX25-203ENST00000504959 PHTF1Q9UMS5 762 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 TFR2Q9UP52 801 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 PCDHA13Q9Y5I0 950 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 SAR1BQ9Y6B6 198 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 COL4A5P29400 1685 aa6.12□□□□□ -1.43
SNX25-203ENST00000504959 GOLGB1Q14789 3259 aaKnown RBP6.12□□□□□ -1.43
SNX25-203ENST00000504959 CCDC151A5D8V7 595 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 PDXKO00764 312 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 DVL2O14641 736 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 EPHB6O15197 1021 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 PSMD10O75832 226 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 PRPF6O94906 941 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 MYL3P08590 195 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 RHOXF2BP0C7M4 288 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 EPB41P11171 864 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 VAV1P15498 845 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 POLD1P28340 1107 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 OAS2P29728 719 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 MAGEA1P43355 309 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 CASP5P51878 434 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 NAP1L1P55209 391 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 ZNF280AP59817 542 aaPredicted RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 POLR2FP61218 127 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 TGFB2P61812 414 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 SMAD3P84022 425 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 CKAP4Q07065 602 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 PPP2R5CQ13362 524 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 SMAD2Q15796 467 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 PLA2G4EQ3MJ16 856 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 TCERG1LQ5VWI1 586 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 IQCEQ6IPM2 695 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 RINT1Q6NUQ1 792 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 ARHGAP27Q6ZUM4 889 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 STXBP4Q6ZWJ1 553 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 FRMD5Q7Z6J6 570 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 RASSF3Q86WH2 238 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 KSR1Q8IVT5 923 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 TRIM58Q8NG06 486 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 TTC17Q96AE7 1141 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 NACC1Q96RE7 527 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 ELF4Q99607 663 aaPredicted RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 RHOXF2Q9BQY4 288 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 CRACR2AQ9BSW2 395 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.11□□□□□ -1.43
SNX25-203ENST00000504959 ASCC2Q9H1I8 757 aaPredicted RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 TAOK3Q9H2K8 898 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 SPON1Q9HCB6 807 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 SMURF1Q9HCE7 757 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 ZCCHC17Q9NP64 241 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 C1GALT1Q9NS00 363 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 CCM2LQ9NUG4 571 aaPredicted RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 FBXO28Q9NVF7 368 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 ARHGAP20Q9P2F6 1191 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 ARHGEF35A5YM69 484 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 RSPH10B2B2RC85 870 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 FAM47E-STBD1D6RA91 191 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 DDX39AO00148 427 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 IPO5O00410 1097 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms