RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 F2RL2O00254 374 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 ADAM10O14672 748 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 VPS4BO75351 444 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 TOMM40O96008 361 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 RARBP10826 455 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 CYP2C18P33260 490 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 IARSP41252 1262 aaKnown RBP2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 C1orf162Q8NEQ5 155 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 NSUN6Q8TEA1 469 aaKnown RBP2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 DNASE2BQ8WZ79 361 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 KAT5Q92993 513 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 DAZAP1Q96EP5 407 aaKnown RBP2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 RITA1Q96K30 269 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 VRK1Q99986 396 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 ANP32EQ9BTT0 268 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 CHMP4AQ9BY43 222 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 FAM126AQ9BYI3 521 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 GPR35Q9HC97 309 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 SLAMF7Q9NQ25 335 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 KLHL13Q9P2N7 655 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 ZMYM2Q9UBW7 1377 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 NT5C1B-RDH14C9J2C7 533 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 FZD9O00144 591 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 SLC16A3O15427 465 aaKnown RBP2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 TLR5O60602 858 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 TULP3O75386 442 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 KIF20AO95235 890 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 ARIH2O95376 493 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 MT-CO1P00395 513 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 GNAI2P04899 355 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 NPSP0C0P6 89 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 FTH1P19P0C7X4 201 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 CHRM3P20309 590 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 EDNRBP24530 442 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 ME1P48163 572 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 GCLCP48506 637 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 PIK3CGP48736 1102 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 SNAPC2Q13487 334 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 INAVAQ3KP66 663 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 UAP1L1Q3KQV9 507 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 TBC1D25Q3MII6 688 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 KHDC1Q4VXA5 237 aaKnown RBP2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 OTUD3Q5T2D3 398 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 VPS53Q5VIR6 699 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 SFRP4Q6FHJ7 346 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 MTHFD1LQ6UB35 978 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 MAVSQ7Z434 540 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 NECAB2Q7Z6G3 386 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 DTX2Q86UW9 622 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 FAM109AQ8N4B1 249 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 C3orf20Q8ND61 904 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 RP9Q8TA86 221 aaKnown RBP2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 CYP2W1Q8TAV3 490 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 DDX17Q92841 729 aaKnown RBP2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 COA7Q96BR5 231 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 FAXDC2Q96IV6 333 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 FAM84BQ96KN1 310 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 DMRTA2Q96SC8 542 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 MEIS3Q99687 375 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 FSD1LQ9BXM9 530 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 DUSP22Q9NRW4 184 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 POLHQ9Y253 713 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 PRKAB1Q9Y478 270 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 CLSPNQ9HAW4 1339 aa2.66□□□□□ -1.98
HMGB3P17-201ENST00000504195 B4DGG1 531 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 PPM1DO15297 605 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 LINC01565O15544 149 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 PDHA1P08559 390 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 MYBL2P10244 700 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 PSG1P11464 419 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 CYP2A6P11509 494 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 PDE1AP54750 535 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 CYP4F2P78329 520 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZXDBP98169 803 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 TCF15Q12870 199 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZNF268Q14587 947 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 KIF22Q14807 665 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 GLIPR1L2Q4G1C9 344 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 ICE2Q659A1 982 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 PDXDC1Q6P996 788 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 TMEM108Q6UXF1 575 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 NPNTQ6UXI9 565 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 NAPRTQ6XQN6 538 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 DEF8Q6ZN54 512 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 PARS2Q7L3T8 475 aaKnown RBP2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 CBARPQ8N350 705 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 ARFGAP1Q8N6T3 406 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 TEKT5Q96M29 485 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZPBPQ9BS86 351 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 TINAGL1Q9GZM7 467 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 FAM234AQ9H0X4 552 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 HS3ST3B1Q9Y662 390 aa2.65□□□□□ -1.99
HMGB3P17-201ENST00000504195 IFITM10A6NMD0 228 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 M0QYG6 137 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 SLC28A2O43868 658 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 CGAP01215 116 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 IL6RP08887 468 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 PRDX5P30044 214 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 PHKA1P46020 1223 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 FXR1P51114 621 aaKnown RBP eCLIP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms