RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SYCP1Q15431 976 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 SLC5A9Q2M3M2 681 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 PABPC1LQ4VXU2 614 aaKnown RBP17.51■□□□□ 0.39
SCLT1-205ENST00000503401 PPP1R26Q5T8A7 1209 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-205ENST00000503401 KLHDC7AQ5VTJ3 777 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 IQCEQ6IPM2 695 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 CYP26C1Q6V0L0 522 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 GET4Q7L5D6 327 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-205ENST00000503401 DNAJB7Q7Z6W7 309 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-205ENST00000503401 NAP1L5Q96NT1 182 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-205ENST00000503401 NECAB3Q96P71 396 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-205ENST00000503401 KCNK16Q96T55 309 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 FAM124BQ9H5Z6 455 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-205ENST00000503401 FAM207AQ9NSI2 230 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-205ENST00000503401 DNAJC12Q9UKB3 198 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 FHOD1Q9Y613 1164 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 BEST1O76090 585 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 SERPINC1P01008 464 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 PNMA6AP0CW24 399 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 CD19P15391 556 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 TRIM21P19474 475 aaKnown RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 VEPH1Q14D04 833 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 TJAP1Q5JTD0 557 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 VSTM1Q6UX27 236 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 RBBP8NLQ8NC74 664 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 ITFG1Q8TB96 612 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 PSMG2Q969U7 264 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 TCEAL4Q96EI5 215 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 RPGRIP1Q96KN7 1286 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 PHF7Q9BWX1 381 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 ZNF334Q9HCZ1 680 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 MAGED2Q9UNF1 606 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 SIK3Q9Y2K2 1263 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 EPHB6O15197 1021 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 AP1G2O75843 785 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 MYL4P12829 197 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 GJA1P17302 382 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 FSHRP23945 695 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 USP8P40818 1118 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 CCR2P41597 374 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 RPL10AP62906 217 aaKnown RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 RAPGEF1Q13905 1077 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 ENOSF1Q7L5Y1 443 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 ING5Q8WYH8 240 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 SMARCD1Q96GM5 515 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 PCMTD1Q96MG8 357 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 HNRNPABQ99729 332 aaKnown RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 ACP6Q9NPH0 428 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 RTN4Q9NQC3 1192 aaKnown RBP17.5■□□□□ 0.39
SCLT1-205ENST00000503401 ASAH2Q9NR71 780 aa17.5■□□□□ 0.39
SCLT1-205ENST00000503401 ATP8B3O60423 1300 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 TRIM66O15016 1216 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 NOL4O94818 638 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 UCHL3P15374 230 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 ANXA13P27216 316 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 SSTR3P32745 418 aaPredicted RBP17.49■□□□□ 0.39
SCLT1-205ENST00000503401 ZNF132P52740 706 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 MAP3K7CLP57077 242 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 FANCCQ00597 558 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 TAF12Q16514 161 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 PDZD4Q76G19 769 aaPredicted RBP17.49■□□□□ 0.39
SCLT1-205ENST00000503401 TMC8Q8IU68 726 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 TFAP2BQ92481 460 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 JAKMIP2Q96AA8 810 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 SMOQ99835 787 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 LRRC3Q9BY71 257 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 DNAI2Q9GZS0 605 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 GANQ9H2C0 597 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 ASB3Q9Y575 518 aa17.49■□□□□ 0.39
SCLT1-205ENST00000503401 OBSL1O75147 1896 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 NCOR1O75376 2440 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 DENND4CQ5VZ89 1909 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 MYO10Q9HD67 2058 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 A0A1B0GTH6 734 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 SLC38A8A6NNN8 435 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 FAM200BP0CF97 657 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 HMGA1P17096 107 aaKnown RBP17.48■□□□□ 0.39
SCLT1-205ENST00000503401 BRD2P25440 801 aaKnown RBP17.48■□□□□ 0.39
SCLT1-205ENST00000503401 ZP2Q05996 745 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 FILIP1LQ4L180 1135 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 SGO2Q562F6 1265 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 ITIH5Q86UX2 942 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 ZMIZ2Q8NF64 920 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 SHC3Q92529 594 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 FAM81BQ96LP2 452 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 ERGIC2Q96RQ1 377 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 ZSWIM1Q9BR11 485 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 GPR88Q9GZN0 384 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 CNTN6Q9UQ52 1028 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 MRPS23Q9Y3D9 190 aaKnown RBP17.48■□□□□ 0.39
SCLT1-205ENST00000503401 PATJQ8NI35 1801 aa17.48■□□□□ 0.39
SCLT1-205ENST00000503401 C2CD4DB7Z1M9 353 aa17.47■□□□□ 0.39
SCLT1-205ENST00000503401 FOXN3O00409 490 aaPredicted RBP17.47■□□□□ 0.39
SCLT1-205ENST00000503401 PAEPP09466 180 aa17.47■□□□□ 0.39
SCLT1-205ENST00000503401 CEBPBP17676 345 aa17.47■□□□□ 0.39
SCLT1-205ENST00000503401 GBP2P32456 591 aaPredicted RBP17.47■□□□□ 0.39
SCLT1-205ENST00000503401 POLR2FP61218 127 aaKnown RBP17.47■□□□□ 0.39
SCLT1-205ENST00000503401 USP46P62068 366 aa17.47■□□□□ 0.39
SCLT1-205ENST00000503401 IFRD2Q12894 506 aaPredicted RBP17.47■□□□□ 0.39
SCLT1-205ENST00000503401 DRAP1Q14919 205 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms