RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 PPM1AP35813 382 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC11A1P49279 550 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 WDR5P61964 334 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 FPGSQ05932 587 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 ITIH3Q06033 890 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 PDE4CQ08493 712 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 MESDQ14696 234 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 TCTN1Q2MV58 587 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 CFAP221Q4G0U5 840 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 PAN2Q504Q3 1202 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 MDH1BQ5I0G3 518 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 FUT10Q6P4F1 479 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 ANKS3Q6ZW76 656 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 FAM35AQ86V20 835 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 TTC30AQ86WT1 665 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 XYLT1Q86Y38 959 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 GPR65Q8IYL9 337 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 FUKQ8N0W3 1084 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 NIPA2Q8N8Q9 360 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 UBA3Q8TBC4 463 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 PHOSPHO2Q8TCD6 241 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 HASPINQ8TF76 798 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 ZNF558Q96NG5 402 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 TRIM62Q9BVG3 475 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 CARD9Q9H257 536 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 TMEM51Q9NW97 253 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 ASNSD1Q9NWL6 643 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 CACNG4Q9UBN1 327 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 DNAJB4Q9UDY4 337 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 PRG3Q9Y2Y8 225 aaPredicted RBP8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 NME7Q9Y5B8 376 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 MICAL3Q7RTP6 2002 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 TET1Q8NFU7 2136 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 MYH10P35580 1976 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CTAGE15A4D2H0 777 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 EFCAB8A8MWE9 144 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 E5RJQ4 531 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 PSTPIP1O43586 416 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 AP1G2O75843 785 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 UPP2O95045 317 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 GLI1P08151 1106 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CTAGE8P0CG41 777 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CCDC130P13994 396 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 COMTP21964 271 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 FGFR3P22607 806 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 ACAT1P24752 427 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 ITGB8P26012 769 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CTNNA1P35221 906 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 GTF2F1P35269 517 aaKnown RBP eCLIP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CETN2P41208 172 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 BCAR1P56945 870 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 RWDD2BP57060 319 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC6A3Q01959 620 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 MRPL58Q14197 206 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 PPP2R5EQ16537 467 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 HADHQ16836 314 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 EFHC1Q5JVL4 640 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 PPP1R15BQ5SWA1 713 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 SPOUT1Q5T280 376 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 FAM102AQ5T9C2 384 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 LRRC38Q5VT99 294 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 OR6B2Q6IFH4 312 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 PMF1Q6P1K2 205 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 VSTM1Q6UX27 236 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC26A9Q7LBE3 791 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 ZNF572Q7Z3I7 529 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CTAGE6Q86UF2 777 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 SPATA2LQ8IUW3 424 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CTAGE4Q8IX94 777 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 RHOT1Q8IXI2 618 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 SCML4Q8N228 414 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 C2orf15Q8WU43 125 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 VWCEQ96DN2 955 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 PCED1BQ96HM7 432 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CEP295NLQ96MC4 621 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 MCEEQ96PE7 176 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC9A7Q96T83 725 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 YME1L1Q96TA2 773 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 TTPALQ9BTX7 342 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 B3GNT5Q9BYG0 378 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 ZCWPW1Q9H0M4 648 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 LRRC4Q9HBW1 653 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CSNK1G1Q9HCP0 422 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 DMAP1Q9NPF5 467 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CRTAC1Q9NQ79 661 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CNGB3Q9NQW8 809 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CYTH4Q9UIA0 394 aa8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 TTC7AQ9ULT0 858 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 TIMM13Q9Y5L4 95 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-202ENST00000503338 CENPFP49454 3210 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 LTBP2Q14767 1821 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 SCN5AQ14524 2016 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 MYBPHLA2RUH7 354 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 TMEM110-MUSTN1A8MSY1 372 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 GOLGA8SH3BPF8 625 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 I3L4J1 428 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 DPYSL4O14531 572 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 KCNK3O14649 394 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 TRIM66O15016 1216 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms