RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 ASB2Q96Q27 587 aa15.05■□□□□ -0
RNF4-202ENST00000502316 ANP32EQ9BTT0 268 aa15.05■□□□□ -0
RNF4-202ENST00000502316 GPR88Q9GZN0 384 aa15.05■□□□□ -0
RNF4-202ENST00000502316 CSNK1G1Q9HCP0 422 aa15.05■□□□□ -0
RNF4-202ENST00000502316 WDR6Q9NNW5 1121 aaKnown RBP15.05■□□□□ -0
RNF4-202ENST00000502316 AVENQ9NQS1 362 aaPredicted RBP15.05■□□□□ -0
RNF4-202ENST00000502316 DNMT3BQ9UBC3 853 aaKnown RBP15.05■□□□□ -0
RNF4-202ENST00000502316 FAM50BQ9Y247 325 aa15.05■□□□□ -0
RNF4-202ENST00000502316 ATP8B3O60423 1300 aa15.05■□□□□ -0
RNF4-202ENST00000502316 MUC3AQ02505 3323 aa15.05■□□□□ -0
RNF4-202ENST00000502316 CLUHO75153 1309 aa15.04■□□□□ -0
RNF4-202ENST00000502316 TRIM66O15016 1216 aa15.04■□□□□ -0
RNF4-202ENST00000502316 EPHB6O15197 1021 aa15.04■□□□□ -0
RNF4-202ENST00000502316 VDRP11473 427 aa15.04■□□□□ -0
RNF4-202ENST00000502316 GPR15P49685 360 aa15.04■□□□□ -0
RNF4-202ENST00000502316 KCNQ1P51787 676 aa15.04■□□□□ -0
RNF4-202ENST00000502316 VEPH1Q14D04 833 aa15.04■□□□□ -0
RNF4-202ENST00000502316 DDR2Q16832 855 aa15.04■□□□□ -0
RNF4-202ENST00000502316 ARHGAP44Q17R89 818 aa15.04■□□□□ -0
RNF4-202ENST00000502316 SGO2Q562F6 1265 aa15.04■□□□□ -0
RNF4-202ENST00000502316 GRASPQ7Z6J2 395 aaPredicted RBP15.04■□□□□ -0
RNF4-202ENST00000502316 ITIH5Q86UX2 942 aa15.04■□□□□ -0
RNF4-202ENST00000502316 ZNF512Q96ME7 567 aaPredicted RBP15.04■□□□□ -0
RNF4-202ENST00000502316 LRRC3Q9BY71 257 aa15.04■□□□□ -0
RNF4-202ENST00000502316 STK33Q9BYT3 514 aa15.04■□□□□ -0
RNF4-202ENST00000502316 POMKQ9H5K3 350 aa15.04■□□□□ -0
RNF4-202ENST00000502316 PIDD1Q9HB75 910 aa15.04■□□□□ -0
RNF4-202ENST00000502316 DMAP1Q9NPF5 467 aaPredicted RBP15.04■□□□□ -0
RNF4-202ENST00000502316 KRT82Q9NSB4 513 aa15.04■□□□□ -0
RNF4-202ENST00000502316 FAM207AQ9NSI2 230 aaPredicted RBP15.04■□□□□ -0
RNF4-202ENST00000502316 HCFC1R1Q9NWW0 138 aa15.04■□□□□ -0
RNF4-202ENST00000502316 NOTCH4Q99466 2003 aa15.04■□□□□ -0
RNF4-202ENST00000502316 F8VP50 259 aa15.03■□□□□ -0
RNF4-202ENST00000502316 F8VZ95 297 aa15.03■□□□□ -0
RNF4-202ENST00000502316 O00370 1275 aa15.03■□□□□ -0
RNF4-202ENST00000502316 FOXN3O00409 490 aaPredicted RBP15.03■□□□□ -0
RNF4-202ENST00000502316 AP1G2O75843 785 aa15.03■□□□□ -0
RNF4-202ENST00000502316 RHOP08100 348 aa15.03■□□□□ -0
RNF4-202ENST00000502316 FAM200BP0CF97 657 aa15.03■□□□□ -0
RNF4-202ENST00000502316 KRT5P13647 590 aa15.03■□□□□ -0
RNF4-202ENST00000502316 PTPN2P17706 415 aa15.03■□□□□ -0
RNF4-202ENST00000502316 GRIK1P39086 918 aa15.03■□□□□ -0
RNF4-202ENST00000502316 PBX1P40424 430 aa15.03■□□□□ -0
RNF4-202ENST00000502316 UBASH3AP57075 661 aa15.03■□□□□ -0
RNF4-202ENST00000502316 PABPC1LQ4VXU2 614 aaKnown RBP15.03■□□□□ -0
RNF4-202ENST00000502316 DNAJB7Q7Z6W7 309 aaPredicted RBP15.03■□□□□ -0
RNF4-202ENST00000502316 GAS2L3Q86XJ1 694 aa15.03■□□□□ -0
RNF4-202ENST00000502316 TMC8Q8IU68 726 aa15.03■□□□□ -0
RNF4-202ENST00000502316 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.03■□□□□ -0
RNF4-202ENST00000502316 SCN4BQ8IWT1 228 aa15.03■□□□□ -0
RNF4-202ENST00000502316 FAM71AQ8IYT1 594 aa15.03■□□□□ -0
RNF4-202ENST00000502316 LEMD2Q8NC56 503 aa15.03■□□□□ -0
RNF4-202ENST00000502316 ZMIZ2Q8NF64 920 aa15.03■□□□□ -0
RNF4-202ENST00000502316 NEK11Q8NG66 645 aa15.03■□□□□ -0
RNF4-202ENST00000502316 TFAP2BQ92481 460 aa15.03■□□□□ -0
RNF4-202ENST00000502316 SMOQ99835 787 aa15.03■□□□□ -0
RNF4-202ENST00000502316 MED10Q9BTT4 135 aa15.03■□□□□ -0
RNF4-202ENST00000502316 PATJQ8NI35 1801 aa15.02■□□□□ -0
RNF4-202ENST00000502316 CSH1P0DML2 217 aa15.02■□□□□ -0
RNF4-202ENST00000502316 CSH2P0DML3 217 aa15.02■□□□□ -0
RNF4-202ENST00000502316 BMP1P13497 986 aa15.02■□□□□ -0
RNF4-202ENST00000502316 IL9P15248 144 aa15.02■□□□□ -0
RNF4-202ENST00000502316 CD19P15391 556 aa15.02■□□□□ -0
RNF4-202ENST00000502316 HMGA1P17096 107 aaKnown RBP15.02■□□□□ -0
RNF4-202ENST00000502316 NPR3P17342 541 aa15.02■□□□□ -0
RNF4-202ENST00000502316 ANXA13P27216 316 aa15.02■□□□□ -0
RNF4-202ENST00000502316 ADORA2BP29275 332 aa15.02■□□□□ -0
RNF4-202ENST00000502316 JAM2P57087 298 aa15.02■□□□□ -0
RNF4-202ENST00000502316 POLR2FP61218 127 aaKnown RBP15.02■□□□□ -0
RNF4-202ENST00000502316 RAPGEF1Q13905 1077 aa15.02■□□□□ -0
RNF4-202ENST00000502316 DRAP1Q14919 205 aaPredicted RBP15.02■□□□□ -0
RNF4-202ENST00000502316 STILQ15468 1287 aa15.02■□□□□ -0
RNF4-202ENST00000502316 SDHAF4Q5VUM1 108 aa15.02■□□□□ -0
RNF4-202ENST00000502316 LCLAT1Q6UWP7 414 aa15.02■□□□□ -0
RNF4-202ENST00000502316 CLEC20AQ6ZU45 233 aa15.02■□□□□ -0
RNF4-202ENST00000502316 ANKRD52Q8NB46 1076 aa15.02■□□□□ -0
RNF4-202ENST00000502316 GPR152Q8TDT2 470 aa15.02■□□□□ -0
RNF4-202ENST00000502316 GIPC2Q8TF65 315 aa15.02■□□□□ -0
RNF4-202ENST00000502316 TRMT2BQ96GJ1 504 aaKnown RBP15.02■□□□□ -0
RNF4-202ENST00000502316 MYRFLQ96LU7 910 aa15.02■□□□□ -0
RNF4-202ENST00000502316 KCNK16Q96T55 309 aa15.02■□□□□ -0
RNF4-202ENST00000502316 ZSWIM1Q9BR11 485 aa15.02■□□□□ -0
RNF4-202ENST00000502316 CORO1BQ9BR76 489 aa15.02■□□□□ -0
RNF4-202ENST00000502316 PHF7Q9BWX1 381 aaPredicted RBP15.02■□□□□ -0
RNF4-202ENST00000502316 DUSP16Q9BY84 665 aa15.02■□□□□ -0
RNF4-202ENST00000502316 PNPLA8Q9NP80 782 aa15.02■□□□□ -0
RNF4-202ENST00000502316 ASAH2Q9NR71 780 aa15.02■□□□□ -0
RNF4-202ENST00000502316 IFNKQ9P0W0 207 aa15.02■□□□□ -0
RNF4-202ENST00000502316 TSPAN16Q9UKR8 245 aa15.02■□□□□ -0
RNF4-202ENST00000502316 DOCK6Q96HP0 2047 aa15.02□□□□□ -0.01
RNF4-202ENST00000502316 GREB1Q4ZG55 1949 aa15.02□□□□□ -0.01
RNF4-202ENST00000502316 SLC38A8A6NNN8 435 aa15.01□□□□□ -0.01
RNF4-202ENST00000502316 TNFRSF10BO14763 440 aa15.01□□□□□ -0.01
RNF4-202ENST00000502316 BEST1O76090 585 aa15.01□□□□□ -0.01
RNF4-202ENST00000502316 MICAL2O94851 1124 aa15.01□□□□□ -0.01
RNF4-202ENST00000502316 CLCN1P35523 988 aa15.01□□□□□ -0.01
RNF4-202ENST00000502316 NTHL1P78549 312 aa15.01□□□□□ -0.01
RNF4-202ENST00000502316 CNGA2Q16280 664 aa15.01□□□□□ -0.01
RNF4-202ENST00000502316 MEA1Q16626 185 aa15.01□□□□□ -0.01
RNF4-202ENST00000502316 SLC5A9Q2M3M2 681 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms