RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 BCRP11274 1271 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 PLTPP55058 493 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 PEX3P56589 373 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 MAGOHP61326 146 aaKnown RBP9.43□□□□□ -0.9
FN1-227ENST00000498719 MRPS9P82933 396 aaKnown RBP9.43□□□□□ -0.9
FN1-227ENST00000498719 MESDQ14696 234 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 KRT71Q3SY84 523 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 SLC47A2Q86VL8 602 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 TRIM42Q8IWZ5 723 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 GIMAP1Q8WWP7 306 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 MAGOHBQ96A72 148 aaKnown RBP9.43□□□□□ -0.9
FN1-227ENST00000498719 GPATCH1Q9BRR8 931 aaKnown RBP9.43□□□□□ -0.9
FN1-227ENST00000498719 EHMT1Q9H9B1 1298 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 LARSQ9P2J5 1176 aaKnown RBP9.43□□□□□ -0.9
FN1-227ENST00000498719 SUN2Q9UH99 717 aa9.43□□□□□ -0.9
FN1-227ENST00000498719 EIF2B4Q9UI10 523 aaKnown RBP9.43□□□□□ -0.9
FN1-227ENST00000498719 TTC7AQ9ULT0 858 aaPredicted RBP9.43□□□□□ -0.9
FN1-227ENST00000498719 TNPO3Q9Y5L0 923 aaKnown RBP9.43□□□□□ -0.9
FN1-227ENST00000498719 WDR81Q562E7 1941 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 CYP26A1O43174 497 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 EOMESO95936 686 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 CFHP08603 1231 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 CHRNB2P17787 502 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 EIF2AK2P19525 551 aaKnown RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 TFE3P19532 575 aaPredicted RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 SOX10P56693 466 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 MRPS35P82673 323 aaKnown RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 CENPCQ03188 943 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 EPC2Q52LR7 807 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 PLA2G4FQ68DD2 849 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 DUPD1Q68J44 220 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 IRGCQ6NXR0 463 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 INTS8Q75QN2 995 aaKnown RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 HAUS6Q7Z4H7 955 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 CBWD2Q8IUF1 395 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 MDM1Q8TC05 714 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 FBXO25Q8TCJ0 367 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 TRIM63Q969Q1 353 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 CCDC127Q96BQ5 260 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 SAAL1Q96ER3 474 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 KREMEN1Q96MU8 473 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 RIT2Q99578 217 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 ERP44Q9BS26 406 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 ZNF341Q9BYN7 854 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 TMEM117Q9H0C3 514 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 EPB41L4BQ9H329 900 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 ZNF277Q9NRM2 450 aaPredicted RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 ZDHHC18Q9NUE0 388 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 KCTD5Q9NXV2 234 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 GPRC5BQ9NZH0 403 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 ZNRF3Q9ULT6 936 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 USP3Q9Y6I4 520 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 COL4A5P29400 1685 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 DOCK5Q9H7D0 1870 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 COL2A1P02458 1487 aaPredicted RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 B4E171 279 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 EIF3FO00303 357 aaPredicted RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 PLSCR1O15162 318 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 ATP9AO75110 1047 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 SLITRK5O94991 958 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 MMEP08473 750 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 CELA3AP09093 270 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 CCDC172P0C7W6 258 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 PYGMP11217 842 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 ALAS1P13196 640 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 KRT10P13645 584 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 COMTP21964 271 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 ADSSP30520 456 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 NPTX2P47972 431 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 HSD17B4P51659 736 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 TRAF1Q13077 416 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 TTC27Q6P3X3 843 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 DNAJB7Q7Z6W7 309 aaPredicted RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 CMTR2Q8IYT2 770 aaKnown RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 PRELID2Q8N945 189 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 XXYLT1Q8NBI6 393 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 CLEC4DQ8WXI8 215 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 DPF3Q92784 378 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 SEMA4DQ92854 862 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 CNKSR1Q969H4 720 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 RAVER2Q9HCJ3 691 aaKnown RBP9.42□□□□□ -0.9
FN1-227ENST00000498719 FAM114A2Q9NRY5 505 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 GIT1Q9Y2X7 761 aa9.42□□□□□ -0.9
FN1-227ENST00000498719 SMIM23A6NLE4 172 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 ANKRD63C9JTQ0 380 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 AP1G1O43747 822 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 FAM107AO95990 144 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 POLBP06746 335 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 PLS3P13797 630 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 GSTT1P30711 240 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 YWHABP31946 246 aaKnown RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 QARSP47897 775 aaKnown RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 MXI1P50539 228 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 GDF10P55107 478 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 ERVK-21P61565 698 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 IFFO1Q0D2I5 559 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 ZDHHC24Q6UX98 284 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 NSMFQ6X4W1 530 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 PDZD4Q76G19 769 aaPredicted RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 FGD2Q7Z6J4 655 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms