RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 NID2Q14112 1375 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 CNTNAP2Q9UHC6 1331 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 A0A087WV48 116 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 CYP3A7-CYP3A51PA0A087WV96 503 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 CCDC163A0A0D9SF12 145 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 SLC38A8A6NNN8 435 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 TSPAN1O60635 241 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 AKAP3O75969 853 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 RHOBTB1O94844 696 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 ALX3O95076 343 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 NPTXRO95502 500 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 RPLP1P05386 114 aaKnown RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 P4HBP07237 508 aaKnown RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 RHOP08100 348 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 PSMC3P17980 439 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 LIG1P18858 919 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 CYP3A7P24462 503 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 ITPKBP27987 946 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 HOXA11P31270 313 aaPredicted RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 YWHABP31946 246 aaKnown RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 NAA30Q147X3 362 aaPredicted RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 EMC2Q15006 297 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 PON2Q15165 354 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 EPHA7Q15375 998 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 ELF2Q15723 593 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 NPY5RQ15761 445 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 USP41Q3LFD5 358 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 EARS2Q5JPH6 523 aaKnown RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 DGKKQ5KSL6 1271 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 RTP2Q5QGT7 225 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 LIN9Q5TKA1 542 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 FUT10Q6P4F1 479 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 CPLX2Q6PUV4 134 aaKnown RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 PCSK4Q6UW60 755 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 RUFY3Q7L099 469 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 SRGAP1Q7Z6B7 1085 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 MRPL10Q7Z7H8 261 aaKnown RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 NEK8Q86SG6 692 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 FERMT3Q86UX7 667 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 MARCH9Q86YJ5 346 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 TMEFF1Q8IYR6 380 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 SLC7A14Q8TBB6 771 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 PIP4K2CQ8TBX8 421 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 RSPH1Q8WYR4 309 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 KCNB2Q92953 911 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 LXNQ9BS40 222 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 AGXT2Q9BYV1 514 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 CEP41Q9BYV8 373 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 TRIM6Q9C030 488 aaPredicted RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 ZFP14Q9HCL3 533 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 SH3GLB2Q9NR46 395 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 ABI2Q9NYB9 513 aaPredicted RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 KANSL3Q9P2N6 904 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 MBD1Q9UIS9 605 aaPredicted RBP6.1□□□□□ -1.43
SPTA1-209ENST00000498708 VAV3Q9UKW4 847 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 CYP46A1Q9Y6A2 500 aa6.1□□□□□ -1.43
SPTA1-209ENST00000498708 SPTAN1Q13813 2472 aaKnown RBP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 COL6A6A6NMZ7 2263 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 DOPEY2Q9Y3R5 2298 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 ARL5CA6NH57 179 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CASTOR2A6NHX0 329 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 ZNF263O14978 683 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 B4GALT5O43286 388 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 DKC1O60832 514 aaKnown RBP eCLIP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 HOXA9P31269 272 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CD68P34810 354 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 RDXP35241 583 aaKnown RBP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CCR2P41597 374 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 KPNA1P52294 538 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CFHR1Q03591 330 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CYP4F3Q08477 520 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 SCRN1Q12765 414 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 PPP2R5CQ13362 524 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CAPSQ13938 189 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 ZNF423Q2M1K9 1284 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 AXDND1Q5T1B0 1012 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 TMEM164Q5U3C3 297 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CEP135Q66GS9 1140 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 MOXD1Q6UVY6 613 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 OTUD6AQ7L8S5 288 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CEP57Q86XR8 500 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 DAGLBQ8NCG7 672 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 LSM14AQ8ND56 463 aaKnown RBP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CNNM3Q8NE01 707 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 ASAP3Q8TDY4 903 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 TCP11Q8WWU5 503 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 ADAMTS14Q8WXS8 1223 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 HAS1Q92839 578 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 RSPRY1Q96DX4 576 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CCDC43Q96MW1 224 aaKnown RBP6.09□□□□□ -1.43
SPTA1-209ENST00000498708 ASB16Q96NS5 453 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CAMK1GQ96NX5 476 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 HHIPQ96QV1 700 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 PAAF1Q9BRP4 392 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 COLEC11Q9BWP8 271 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 CSRNP2Q9H175 543 aa6.09□□□□□ -1.43
SPTA1-209ENST00000498708 NXF3Q9H4D5 531 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms