RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 UNC5CO95185 931 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 CSF1RP07333 972 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 POU2F2P09086 479 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 CYP2A6P11509 494 aaPredicted RBP4.99□□□□□ -1.61
SMC4-227ENST00000497984 NKX6-1P78426 367 aaPredicted RBP4.99□□□□□ -1.61
SMC4-227ENST00000497984 GTF2H3Q13889 308 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 RAPGEF1Q13905 1077 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 FAM50AQ14320 339 aaKnown RBP4.99□□□□□ -1.61
SMC4-227ENST00000497984 SAMD14Q8IZD0 417 aaPredicted RBP4.99□□□□□ -1.61
SMC4-227ENST00000497984 TERB1Q8NA31 727 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 PCSK9Q8NBP7 692 aaKnown RBP4.99□□□□□ -1.61
SMC4-227ENST00000497984 ABHD11Q8NFV4 315 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 XAGE5Q8WWM1 108 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 SOCS4Q8WXH5 440 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 SNX18Q96RF0 628 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 ADGRE3Q9BY15 652 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 TRNAU1APQ9NX07 287 aaKnown RBP4.99□□□□□ -1.61
SMC4-227ENST00000497984 MTMR4Q9NYA4 1195 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 ZNF580Q9UK33 172 aa4.99□□□□□ -1.61
SMC4-227ENST00000497984 SCAF8Q9UPN6 1271 aaKnown RBP4.99□□□□□ -1.61
SMC4-227ENST00000497984 FCHO1O14526 889 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 ATP5F1P24539 256 aaPredicted RBP4.98□□□□□ -1.61
SMC4-227ENST00000497984 VIPR2P41587 438 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 TPTEP56180 551 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 SOX8P57073 446 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 LINC00205P59089 165 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 GPSM2P81274 684 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 E2F2Q14209 437 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 PLS1Q14651 629 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 LRRC41Q15345 812 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 RUSC1-AS1Q66K80 236 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 PRPF38AQ8NAV1 312 aaKnown RBP4.98□□□□□ -1.61
SMC4-227ENST00000497984 BRIX1Q8TDN6 353 aaKnown RBP4.98□□□□□ -1.61
SMC4-227ENST00000497984 PIGOQ8TEQ8 1089 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 COQ8BQ96D53 544 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 PLEKHM1Q9Y4G2 1056 aa4.98□□□□□ -1.61
SMC4-227ENST00000497984 TCRBV5S1A1TA0A578 114 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 hCG_1984214I3L0E3 225 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 SOCS2O14508 198 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 EXOC3O60645 756 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 USP1O94782 785 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 GRPP07492 148 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 CHRM5P08912 532 aaPredicted RBP4.97□□□□□ -1.61
SMC4-227ENST00000497984 RECQLP46063 649 aaPredicted RBP4.97□□□□□ -1.61
SMC4-227ENST00000497984 PLCD1P51178 756 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 RENBPP51606 427 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 GPR162Q16538 588 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 CYP1B1Q16678 543 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 TBC1D25Q3MII6 688 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 AMOTQ4VCS5 1084 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 MTHFD1LQ6UB35 978 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 IRF2BP2Q7Z5L9 587 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 ZDHHC17Q8IUH5 632 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 CELF5Q8N6W0 485 aaKnown RBP4.97□□□□□ -1.61
SMC4-227ENST00000497984 NANOGP1Q8N7R0 232 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 NRACQ8N912 160 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
SMC4-227ENST00000497984 MRPS17Q9Y2R5 130 aaKnown RBP4.97□□□□□ -1.61
SMC4-227ENST00000497984 SNHG28P0DPA3 235 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 CCND1P24385 295 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 FPR3P25089 353 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 IL1R2P27930 398 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 TKTP29401 623 aaKnown RBP4.96□□□□□ -1.62
SMC4-227ENST00000497984 EVA1CP58658 441 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 AMPD3Q01432 767 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 PGS1Q32NB8 556 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 CERKLQ49MI3 558 aaPredicted RBP4.96□□□□□ -1.62
SMC4-227ENST00000497984 RNASE12Q5GAN4 147 aaKnown RBP4.96□□□□□ -1.62
SMC4-227ENST00000497984 MEX3CQ5U5Q3 659 aaKnown RBP4.96□□□□□ -1.62
SMC4-227ENST00000497984 CATIPQ7Z7H3 387 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 SLC35A4Q96G79 324 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 MOGAT1Q96PD6 335 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 FAM118BQ9BPY3 351 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 ASPSCR1Q9BZE9 553 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 CIPCQ9C0C6 399 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 EBF3Q9H4W6 596 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 CXorf36Q9H7Y0 433 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 XPR1Q9UBH6 696 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 CCNL1Q9UK58 526 aaPredicted RBP4.96□□□□□ -1.62
SMC4-227ENST00000497984 SHOC2Q9UQ13 582 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 LRP12Q9Y561 859 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 WASHC2CQ9Y4E1 1318 aa4.96□□□□□ -1.62
SMC4-227ENST00000497984 ALG1L2C9J202 215 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 H3BUI4 141 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 FGBP02675 491 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 DLDP09622 509 aaKnown RBP4.95□□□□□ -1.62
SMC4-227ENST00000497984 ADORA2AP29274 412 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 PDE6CP51160 858 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 MYO1EQ12965 1108 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 ZIK1Q3SY52 487 aaPredicted RBP4.95□□□□□ -1.62
SMC4-227ENST00000497984 TMEM240Q5SV17 173 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 L1TD1Q5T7N2 865 aaKnown RBP4.95□□□□□ -1.62
SMC4-227ENST00000497984 DEPDC1Q5TB30 811 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 ZNF813Q6ZN06 617 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 ZNF280BQ86YH2 543 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 C16orf52Q8NHV5 167 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 PUS7Q96PZ0 661 aaKnown RBP4.95□□□□□ -1.62
SMC4-227ENST00000497984 GTPBP4Q9BZE4 634 aaKnown RBP4.95□□□□□ -1.62
SMC4-227ENST00000497984 PCDHA6Q9UN73 950 aa4.95□□□□□ -1.62
SMC4-227ENST00000497984 SPEF1Q9Y4P9 236 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms