RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 KDELR1P24390 212 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 PHKA2P46019 1235 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 LMNB2Q03252 620 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 HIF1AQ16665 826 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 PLPPR4Q7Z2D5 763 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 TRPM8Q7Z2W7 1104 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 ACOT1Q86TX2 421 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 BBOF1Q8ND07 529 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 SPATA18Q8TC71 538 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 KIF12Q96FN5 646 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 B3GNT5Q9BYG0 378 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 MAGEB5Q9BZ81 275 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 NSRP1Q9H0G5 558 aaKnown RBP12.11□□□□□ -0.47
CDCA7-208ENST00000496441 PNMA3Q9UL41 463 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 USP18Q9UMW8 372 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 SNX9Q9Y5X1 595 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 IGKV6-21A0A0C4DH24 114 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 B4GALT4O60513 344 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 SLC25A27O95847 323 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 CPP00450 1065 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 RBP3P10745 1247 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 PDGFRAP16234 1089 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 ADORA2AP29274 412 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 SLC25A11Q02978 314 aaKnown RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 ARMC9Q7Z3E5 817 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 CNPY4Q8N129 248 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 PYROXD1Q8WU10 500 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 TBC1D31Q96DN5 1066 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 MAK16Q9BXY0 300 aaKnown RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 PDZD7Q9H5P4 517 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 TRIM33Q9UPN9 1127 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 CHMP2BQ9UQN3 213 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 NR2E3Q9Y5X4 410 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 SIGLEC16A6NMB1 481 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 MED7O43513 233 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 SNX3O60493 162 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 OSBPP22059 807 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 PROZP22891 400 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 FOXN2P32314 431 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 RPA3P35244 121 aaPredicted RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 EIF3EP60228 445 aaKnown RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 TMEM132DQ14C87 1099 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 E2F5Q15329 346 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 SURF1Q15526 300 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 OASLQ15646 514 aaKnown RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 TNFAIP8L3Q5GJ75 292 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 DARS2Q6PI48 645 aaKnown RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 C3orf62Q6ZUJ4 267 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 ILDR2Q71H61 639 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 PIGWQ7Z7B1 504 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 TRABDQ9H4I3 376 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 TSPAN16Q9UKR8 245 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 STRIP2Q9ULQ0 834 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 TNFSF13BQ9Y275 285 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 STK38LQ9Y2H1 464 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 SCN1AP35498 2009 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 H7C0C1 242 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 LGR5O75473 907 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 PDGFRBP09619 1106 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 GCAP28676 217 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 RPL22P35268 128 aaKnown RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 ATP5OP48047 213 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 YARSP54577 528 aaKnown RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 ENPEPQ07075 957 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 STAT4Q14765 748 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 ZC3H12AQ5D1E8 599 aaKnown RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 RNASEH2BQ5TBB1 312 aaKnown RBP12.1□□□□□ -0.47
CDCA7-208ENST00000496441 CENPUQ71F23 418 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 PEBP4Q96S96 227 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 PITPNM3Q9BZ71 974 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 SETD4Q9NVD3 440 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 KLK14Q9P0G3 267 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 BAIAP2L1Q9UHR4 511 aa12.1□□□□□ -0.47
CDCA7-208ENST00000496441 SYNJ2BP-COX16A0A087WUM0 186 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 C3orf70A6NLC5 250 aaPredicted RBP12.09□□□□□ -0.47
CDCA7-208ENST00000496441 SRRM3A6NNA2 597 aaPredicted RBP12.09□□□□□ -0.47
CDCA7-208ENST00000496441 H3BRB1 525 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 KRT4P19013 534 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 GJA5P36382 358 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 WDR4P57081 412 aaKnown RBP12.09□□□□□ -0.47
CDCA7-208ENST00000496441 ARHGAP1Q07960 439 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 ARHGEF18Q6ZSZ5 1173 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 PALM2Q8IXS6 379 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 CCDC63Q8NA47 563 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 FBXO36Q8NEA4 188 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.09□□□□□ -0.47
CDCA7-208ENST00000496441 RXFP2Q8WXD0 754 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 LENG1Q96BZ8 264 aaPredicted RBP12.09□□□□□ -0.47
CDCA7-208ENST00000496441 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 ZNF518BQ9C0D4 1074 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 TUT1Q9H6E5 874 aaKnown RBP12.09□□□□□ -0.47
CDCA7-208ENST00000496441 DPP3Q9NY33 737 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 DDX56Q9NY93 547 aaKnown RBP12.09□□□□□ -0.47
CDCA7-208ENST00000496441 COX16Q9P0S2 106 aa12.09□□□□□ -0.47
CDCA7-208ENST00000496441 XPO7Q9UIA9 1087 aaKnown RBP12.09□□□□□ -0.47
CDCA7-208ENST00000496441 PCDHGC3Q9UN70 934 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms