RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 EIF4E1BA6NMX2 242 aaKnown RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CYB561D2O14569 222 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 FAM228BP0C875 321 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CSH1P0DML2 217 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CSH2P0DML3 217 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 FERP16591 822 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 TNFRSF8P28908 595 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 SOX5P35711 763 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 DPP6P42658 865 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CYP2J2P51589 502 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CBWD6Q4V339 395 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CBWD3Q5JTY5 395 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CLLU1OSQ5K130 101 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CBWD5Q5RIA9 395 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 GPD1LQ8N335 351 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 C12orf76Q8N812 135 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 SLC30A5Q8TAD4 765 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 ACDQ96AP0 544 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 TARS2Q9BW92 718 aaKnown RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 NXF3Q9H4D5 531 aaKnown RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 KIF9Q9HAQ2 790 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 ABI2Q9NYB9 513 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 HESX1Q9UBX0 185 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CDV3Q9UKY7 258 aaKnown RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CDY1Q9Y6F8 540 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 A0A0A6YYK5 440 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 PBX3P40426 434 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 GTF2BQ00403 316 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 DSG1Q02413 1049 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 TMEM86AQ8N2M4 240 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 ARHGEF3Q9NR81 526 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 USP20Q9Y2K6 914 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 LINC01565O15544 149 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 GFRA3O60609 400 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 GFPT2O94808 682 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 EPCAMP16422 314 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 OAS2P29728 719 aaKnown RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 NPTX2P47972 431 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 FAM187BQ17R55 369 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 RSPO2Q6UXX9 243 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CDR2LQ86X02 465 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 TRAIPQ9BWF2 469 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 STK33Q9BYT3 514 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 NCANO14594 1321 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 DOCK3Q8IZD9 2030 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 F8VZ95 297 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 USP17L7P0C7H9 530 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 STAT1P42224 750 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 PIK3CAP42336 1068 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 TERF2Q15554 542 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 DGKKQ5KSL6 1271 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 TLR10Q9BXR5 811 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CDHR5Q9HBB8 845 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 INTUQ9ULD6 942 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 STRIP2Q9ULQ0 834 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 L1RE1Q9UN81 338 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CEP83Q9Y592 693 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 RHOBTB1O94844 696 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 NOP2P46087 812 aaKnown RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 SKA1Q96BD8 255 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 SYT11Q9BT88 431 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 ASB7Q9H672 318 aa9.03□□□□□ -0.96
VPS13B-206ENST00000496144 AFF4Q9UHB7 1163 aaKnown RBP9.03□□□□□ -0.96
VPS13B-206ENST00000496144 CSTF1Q05048 431 aaKnown RBP9.02□□□□□ -0.96
VPS13B-206ENST00000496144 LNX1Q8TBB1 728 aaPredicted RBP9.02□□□□□ -0.96
VPS13B-206ENST00000496144 EPHX3Q9H6B9 360 aa9.02□□□□□ -0.96
VPS13B-206ENST00000496144 TBC1D17Q9HA65 648 aa9.02□□□□□ -0.96
VPS13B-206ENST00000496144 RBAKQ9NYW8 714 aaPredicted RBP9.02□□□□□ -0.96
VPS13B-206ENST00000496144 WEE2P0C1S8 567 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 DLATP10515 647 aaKnown RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 IRS1P35568 1242 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 CCR3P51677 355 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 DUOXA2Q1HG44 320 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 AASDHQ4L235 1098 aaPredicted RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 GRASPQ7Z6J2 395 aaPredicted RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 SPAG5Q96R06 1193 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 CDK5RAP1Q96SZ6 601 aaKnown RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 GDE1Q9NZC3 331 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 EPOPA6NHQ4 379 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 TRIM66O15016 1216 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 P4HA2O15460 535 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 N4BP1O75113 896 aaKnown RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 CKMP06732 381 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 CLCN5P51795 746 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 ZNF667Q5HYK9 610 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 TPRG1Q6ZUI0 275 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 TRMT11Q7Z4G4 463 aaKnown RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 FMNL3Q8IVF7 1028 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 ARHGAP18Q8N392 663 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 EIF2AQ9BY44 585 aaKnown RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 GPRC5CQ9NQ84 441 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 RNF14Q9UBS8 474 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 AGAP1Q9UPQ3 857 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 TMEM150BA6NC51 233 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 TBC1D4O60343 1298 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 C1RP00736 705 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms