RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-225	ENST00000495471	CYP2D6	P10635	497 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	NPR1	P16066	1061 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	KEL	P23276	732 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	ADORA2A	P29274	412 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	LRPAP1	P30533	357 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	RAB27A	P51159	221 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	ARFIP2	P53365	341 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	CEP78	Q5JTW2	689 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	DEPDC1	Q5TB30	811 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	B3GNT9	Q6UX72	402 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	PARS2	Q7L3T8	475 aa	Known RBP	4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	NEK8	Q86SG6	692 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	TPH2	Q8IWU9	490 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	DNAJC5G	Q8N7S2	189 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	RP9	Q8TA86	221 aa	Known RBP	4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	XAGE5	Q8WWM1	108 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	JPH3	Q8WXH2	748 aa	Predicted RBP	4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	AIFM3	Q96NN9	605 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	ACO2	Q99798	780 aa	Known RBP	4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	SH2D3A	Q9BRG2	576 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	MESP1	Q9BRJ9	268 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	TRIM54	Q9BYV2	358 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	SEMA4C	Q9C0C4	833 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	NMRK2	Q9NPI5	230 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	PIH1D1	Q9NWS0	290 aa	Known RBP	4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	DDX56	Q9NY93	547 aa	Known RBP	4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	ZNF180	Q9UJW8	692 aa		4.9	□□□□□ -1.63
CCNL1-225	ENST00000495471	PRRT4	C9JH25	899 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	MYO1C	O00159	1063 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	TP73	O15350	636 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	PDGFRB	P09619	1106 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	NPS	P0C0P6	89 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	HSPA6	P17066	643 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	CTGF	P29279	349 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	PDE6C	P51160	858 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	WNT3	P56703	355 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	KLF9	Q13886	244 aa	Predicted RBP	4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	SUPT20HL1	Q3ZLR7	823 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471		Q6ZWC4	215 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	YTHDF3	Q7Z739	585 aa	Known RBP	4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	DAAM2	Q86T65	1068 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	CHSY1	Q86X52	802 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	COL23A1	Q86Y22	540 aa	Predicted RBP	4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	SLC15A3	Q8IY34	581 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	SLC15A4	Q8N697	577 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	CYP2W1	Q8TAV3	490 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	SLC35G2	Q8TBE7	412 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	SOCS4	Q8WXH5	440 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	PUS7	Q96PZ0	661 aa	Known RBP	4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	TAAR9	Q96RI9	348 aa		4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	QTRT1	Q9BXR0	403 aa	Known RBP	4.89	□□□□□ -1.63
CCNL1-225	ENST00000495471	E2F8	A0AVK6	867 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	MYO1F	O00160	1098 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	PPP6C	O00743	305 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	TJP3	O95049	919 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	PDE8B	O95263	885 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	VNN1	O95497	513 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	MYB	P10242	640 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	CYP2C9	P11712	490 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	CERS1	P27544	350 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	TPTE	P56180	551 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	HOXA4	Q00056	320 aa	Predicted RBP	4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	TRIM72	Q6ZMU5	477 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	PNLDC1	Q8NA58	520 aa	Known RBP	4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	ZBTB34	Q8NCN2	500 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	OSCP1	Q8WVF1	389 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	KBTBD7	Q8WVZ9	684 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	THAP7	Q9BT49	309 aa	Predicted RBP	4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	ZMAT3	Q9HA38	289 aa	Known RBP	4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	ANLN	Q9NQW6	1124 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	CCNL1	Q9UK58	526 aa	Predicted RBP	4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	GABRQ	Q9UN88	632 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	BTBD3	Q9Y2F9	522 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	SNX14	Q9Y5W7	946 aa		4.88	□□□□□ -1.63
CCNL1-225	ENST00000495471	ADAMTS3	O15072	1205 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	KIT	P10721	976 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	KCNA3	P22001	575 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	DGKE	P52429	567 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	GPSM2	P81274	684 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	SATB1	Q01826	763 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	KRT17	Q04695	432 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	CTBP1	Q13363	440 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	ETFDH	Q16134	617 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	CYP1B1	Q16678	543 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	LY6K	Q17RY6	165 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	MORN5	Q5VZ52	161 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	FCRL6	Q6DN72	434 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	SLC18B1	Q6NT16	456 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	C11orf87	Q6NUJ2	197 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	KIRREL2	Q6UWL6	708 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	ZNF783	Q6ZMS7	281 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	DPY19L3	Q6ZPD9	716 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	GAS2L3	Q86XJ1	694 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	ABRA	Q8N0Z2	381 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	LENG8	Q96PV6	779 aa	Predicted RBP	4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	DPH1	Q9BZG8	443 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471	CDH19	Q9H159	772 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms