RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-240	ENST00000495293		F5H6K3	240 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	ORC4	O43929	436 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	ZBED4	O75132	1171 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	S100B	P04271	92 aa	Predicted RBP	5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	PDGFRB	P09619	1106 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	MAPK4	P31152	587 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	NEK4	P51957	841 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	NANOS3	P60323	173 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	UBXN2A	P68543	259 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	KLRC3	Q07444	240 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	IK	Q13123	557 aa	Predicted RBP	5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	PLS1	Q14651	629 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	SART3	Q15020	963 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	SHROOM1	Q2M3G4	852 aa	Predicted RBP	5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	SLC9C1	Q4G0N8	1177 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	C1QL3	Q5VWW1	255 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	UBE2R2	Q712K3	238 aa	Predicted RBP	5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	HSCB	Q8IWL3	235 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	SPICE1	Q8N0Z3	855 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	MB21D1	Q8N884	522 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	CHTF18	Q8WVB6	975 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	NINJ1	Q92982	152 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	CEP95	Q96GE4	821 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	RPL10L	Q96L21	214 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	TTC14	Q96N46	770 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	TARS2	Q9BW92	718 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	WDR26	Q9H7D7	661 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	TYW1	Q9NV66	732 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	OXSM	Q9NWU1	459 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	SLC5A4	Q9NY91	659 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	MTMR4	Q9NYA4	1195 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	RABGAP1	Q9Y3P9	1069 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	PCSK5	Q92824	1860 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	LOC285556	D6RIA3	1793 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293	PTPRF	P10586	1907 aa		5.19	□□□□□ -1.58
RBM39-240	ENST00000495293		A0A1W2PRX2	142 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	SMIM22	K7EJ46	135 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	SLC25A27	O95847	323 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	HSP90AA1	P07900	732 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	ADH4	P08319	380 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	TOP1	P11387	765 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	PTMS	P20962	102 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	COPB2	P35606	906 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	SLC1A4	P43007	532 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	TOB2	Q14106	344 aa	Predicted RBP	5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	MYBPC3	Q14896	1274 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	ARHGAP44	Q17R89	818 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	FAM83B	Q5T0W9	1011 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	PRAMEF9	Q5VWM5	478 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	GAREM2	Q75VX8	874 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	ZNF575	Q86XF7	245 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	PRPF38A	Q8NAV1	312 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	GMCL1P1	Q8NEA9	526 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	OR5AN1	Q8NGI8	311 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	NCOA7	Q8NI08	942 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	WDR48	Q8TAF3	677 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	CHURC1	Q8WUH1	139 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	C16orf92	Q96LL3	132 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	FOXB1	Q99853	325 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	SLF1	Q9BQI6	1058 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	UBAC1	Q9BSL1	405 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	ARHGAP39	Q9C0H5	1083 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	KAT14	Q9H8E8	782 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	TCP11L1	Q9NUJ3	509 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	THG1L	Q9NWX6	298 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	MORF4L1	Q9UBU8	362 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	FEM1B	Q9UK73	627 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	G3BP2	Q9UN86	482 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	DMRT1	Q9Y5R6	373 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	RBM8A	Q9Y5S9	174 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	ADGRA2	Q96PE1	1338 aa		5.18	□□□□□ -1.58
RBM39-240	ENST00000495293	IGKV6D-41	A0A0C4DH26	115 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	UBA6	A0AVT1	1052 aa	Predicted RBP	5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	TMEM232	C9JQI7	657 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	STRN	O43815	780 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	NDUFB10	O96000	172 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	ZKSCAN1	P17029	563 aa	Predicted RBP	5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	MCC	P23508	829 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	FLT3	P36888	993 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	RGS2	P41220	211 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	FLT3LG	P49771	235 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	STAT2	P52630	851 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	RABGGTB	P53611	331 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	DSG1	Q02413	1049 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	PRKCZ	Q05513	592 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	CCDC96	Q2M329	555 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	SLFN12L	Q6IEE8	588 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	KLHDC10	Q6PID8	442 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	DPP9	Q86TI2	863 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	FAM160B2	Q86V87	743 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	SKAP1	Q86WV1	359 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	DGKH	Q86XP1	1220 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	SYNPO	Q8N3V7	929 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	ANKRD53	Q8N9V6	530 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	SOCS4	Q8WXH5	440 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	MAP4K1	Q92918	833 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	MROH8	Q9H579	483 aa		5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	INTS7	Q9NVH2	962 aa	Known RBP	5.17	□□□□□ -1.58
RBM39-240	ENST00000495293	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.17	□□□□□ -1.58

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