RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CHADO15335 359 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 TADA3O75528 432 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 AKAP3O75969 853 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 VNN1O95497 513 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 ADCY5O95622 1261 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 GNL1P36915 607 aaPredicted RBP14.07□□□□□ -0.16
ERCC3-209ENST00000494464 MAGEA9P43362 315 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 MLLT6P55198 1093 aaPredicted RBP14.07□□□□□ -0.16
ERCC3-209ENST00000494464 DDR2Q16832 855 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 DPCR1Q3MIW9 517 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 ZNF667Q5HYK9 610 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 C1orf220Q5T0J3 134 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 SARM1Q6SZW1 724 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 TPRG1Q6ZUI0 275 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 OR6B3Q8NGW1 331 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 SPATA20Q8TB22 786 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 TAF4BQ92750 862 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 MSANTD3Q96H12 275 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 PCED1BQ96HM7 432 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 SPATA17Q96L03 361 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 HEBP1Q9NRV9 189 aa14.07□□□□□ -0.16
ERCC3-209ENST00000494464 MAGEC2Q9UBF1 373 aaPredicted RBP14.07□□□□□ -0.16
ERCC3-209ENST00000494464 NXF1Q9UBU9 619 aaKnown RBP14.07□□□□□ -0.16
ERCC3-209ENST00000494464 HELZP42694 1942 aaKnown RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 ANAPC1Q9H1A4 1944 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 SHISA7A6NL88 538 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 SLC38A8A6NNN8 435 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 H0Y858 1186 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 GOLGA6L19H0YKK7 550 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 ZNF263O14978 683 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 SMC2O95347 1197 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 PRAMEF12O95522 483 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 PDGFRBP09619 1106 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 P4HA1P13674 534 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 PSMC2P35998 433 aaKnown RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 VAMP7P51809 220 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 MCCD1P59942 119 aaPredicted RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 SGSM1Q2NKQ1 1148 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 ZNF658Q5TYW1 1059 aaPredicted RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 SDHAF4Q5VUM1 108 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 SV2AQ7L0J3 742 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 DHX40Q8IX18 779 aaKnown RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 YAF2Q8IY57 180 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 FAM186BQ8IYM0 893 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 SMYD4Q8IYR2 804 aaPredicted RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 CMTM8Q8IZV2 173 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 B3GALNT2Q8NCR0 500 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 STKLD1Q8NE28 680 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 MRPS31Q92665 395 aaKnown RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 ATOH1Q92858 354 aaPredicted RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 ERCC4Q92889 916 aaPredicted RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 NELL2Q99435 816 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 GTPBP4Q9BZE4 634 aaKnown RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 ELOVL4Q9GZR5 314 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 SMYD3Q9H7B4 428 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 KIF9Q9HAQ2 790 aa14.06□□□□□ -0.16
ERCC3-209ENST00000494464 MAGED2Q9UNF1 606 aaPredicted RBP14.06□□□□□ -0.16
ERCC3-209ENST00000494464 ZNF638Q14966 1978 aaKnown RBP14.05□□□□□ -0.16
ERCC3-209ENST00000494464 BECN2A8MW95 431 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 MAN2B1O00754 1011 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 DPYSL4O14531 572 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 TRIM66O15016 1216 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 ASS1P00966 412 aaKnown RBP14.05□□□□□ -0.16
ERCC3-209ENST00000494464 DCNP07585 359 aaKnown RBP14.05□□□□□ -0.16
ERCC3-209ENST00000494464 KRT13P13646 458 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 GLULP15104 373 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 PTPN1P18031 435 aaKnown RBP14.05□□□□□ -0.16
ERCC3-209ENST00000494464 BDNFP23560 247 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 TARSP26639 723 aaKnown RBP14.05□□□□□ -0.16
ERCC3-209ENST00000494464 PIK3CAP42336 1068 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 CYP27A1Q02318 531 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 UBXN2BQ14CS0 331 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 ANGPT1Q15389 498 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 ARHGAP29Q52LW3 1261 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 MDH1BQ5I0G3 518 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 C1orf228Q6PIY5 440 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 ZNF852Q6ZMS4 543 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 SCN4BQ8IWT1 228 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 CELF5Q8N6W0 485 aaKnown RBP14.05□□□□□ -0.16
ERCC3-209ENST00000494464 BPIFB1Q8TDL5 484 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 SMARCE1Q969G3 411 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 SLC46A2Q9BY10 475 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 DPEP3Q9H4B8 488 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 FAM86C1Q9NVL1 165 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 MRPS17Q9Y2R5 130 aaKnown RBP14.05□□□□□ -0.16
ERCC3-209ENST00000494464 PCDHA5Q9Y5H7 936 aa14.05□□□□□ -0.16
ERCC3-209ENST00000494464 A8MXQ7 604 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 PROB1E7EW31 1015 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 AP5Z1O43299 807 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 HLA-DRAP01903 254 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 ANXA13P27216 316 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 AVPR1AP37288 418 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 NBL1P41271 181 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 PRCPP42785 496 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 RPS9P46781 194 aaKnown RBP14.04□□□□□ -0.16
ERCC3-209ENST00000494464 PLCB2Q00722 1185 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 ADAM9Q13443 819 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 ZNF268Q14587 947 aaPredicted RBP14.04□□□□□ -0.16
ERCC3-209ENST00000494464 CT47A1Q5JQC4 288 aaPredicted RBP14.04□□□□□ -0.16
ERCC3-209ENST00000494464 SCARA5Q6ZMJ2 495 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms