RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 WSCD1Q658N2 575 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 FBXO38Q6PIJ6 1188 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 FBXO46Q6PJ61 603 aaPredicted RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 OLFML1Q6UWY5 402 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 CTU1Q7Z7A3 348 aaKnown RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 ACOT1Q86TX2 421 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 VSIG1Q86XK7 387 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 CPNE8Q86YQ8 564 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 COLGALT2Q8IYK4 626 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 ADGRF2Q8IZF7 708 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 FUKQ8N0W3 1084 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 UBL4BQ8N7F7 174 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 C12orf50Q8NA57 414 aaPredicted RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 B3GALNT2Q8NCR0 500 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 DBF4BQ8NFT6 615 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 EXD1Q8NHP7 514 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 FAM71BQ8TC56 605 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 CENPIQ92674 756 aaPredicted RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 SLCO2A1Q92959 643 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 NT5C3BQ969T7 300 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 BTBD6Q96KE9 485 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 CAPZA3Q96KX2 299 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 RNPC3Q96LT9 517 aaKnown RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 NAP1L3Q99457 506 aaPredicted RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 ACBD6Q9BR61 282 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 PAAF1Q9BRP4 392 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 DUSP16Q9BY84 665 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 DNAI2Q9GZS0 605 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 RNF208Q9H0X6 261 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 PDCL3Q9H2J4 239 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 DPEP3Q9H4B8 488 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 SLITRK6Q9H5Y7 841 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 CSNK1G1Q9HCP0 422 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 CRTAC1Q9NQ79 661 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 GDF3Q9NR23 364 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 RBM12Q9NTZ6 932 aaKnown RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.17□□□□□ -1.26
MSH5-217ENST00000494458 EHD2Q9NZN4 543 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 TJP2Q9UDY2 1190 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.17□□□□□ -1.26
MSH5-217ENST00000494458 PCYOX1Q9UHG3 505 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 TBX21Q9UL17 535 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 NR2E1Q9Y466 385 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 V9GYY5 206 aaPredicted RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 CEP350Q5VT06 3117 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 C3orf70A6NLC5 250 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 F8VP50 259 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 M0QYV0 167 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 XPO1O14980 1071 aaKnown RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 PAPSS1O43252 624 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 SART1O43290 800 aaKnown RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 HCRTO43612 131 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 CEP104O60308 925 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 B4GALT3O60512 393 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 DDHD2O94830 711 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 KRT3P12035 628 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 PCK1P35558 622 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 ACADSBP45954 432 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 MARCKSL1P49006 195 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 ARSEP51690 589 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 ZNF143P52747 638 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 BCAT1P54687 386 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 DRG2P55039 364 aaKnown RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 SNX16P57768 344 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 TAS2R40P59535 323 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 COPS2P61201 443 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 SLC6A3Q01959 620 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 SLC25A11Q02978 314 aaKnown RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 PDE4CQ08493 712 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 BST2Q10589 180 aaKnown RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 ORC1Q13415 861 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 NOMO2Q5JPE7 1267 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 BEND6Q5SZJ8 279 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 TEX35Q5T0J7 233 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 TRNP1Q6NT89 227 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 DNAJC24Q6P3W2 148 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 CCNI2Q6ZMN8 369 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 CYP4V2Q6ZWL3 525 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 SLC26A9Q7LBE3 791 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 MTERF4Q7Z6M4 381 aaKnown RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 SLC13A5Q86YT5 568 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 RHOT1Q8IXI2 618 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 CMASQ8NFW8 434 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 OR6B3Q8NGW1 331 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 JOSD2Q8TAC2 188 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 UBA3Q8TBC4 463 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 MYCBPAPQ8TBZ2 947 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.16□□□□□ -1.26
MSH5-217ENST00000494458 SEPT8Q92599 483 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 CASD1Q96PB1 797 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 PSMB7Q99436 277 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 LRRC1Q9BTT6 524 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 EPC1Q9H2F5 836 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 SNX25Q9H3E2 840 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 LRRC19Q9H756 370 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 TBC1D13Q9NVG8 400 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 ASNSD1Q9NWL6 643 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 ZNF446Q9NWS9 450 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms