RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 FAM163BP0C2L3 166 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 CCDC172P0C7W6 258 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 FERP16591 822 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 ACO1P21399 889 aaKnown RBP14.27□□□□□ -0.13
MSH6-208ENST00000493177 LHX1P48742 406 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 GSDMDP57764 484 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 ROR1Q01973 937 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 YWHAHQ04917 246 aaPredicted RBP14.27□□□□□ -0.13
MSH6-208ENST00000493177 OVOS1Q6IE37 1185 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 CCDC186Q7Z3E2 898 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 GRASPQ7Z6J2 395 aaPredicted RBP14.27□□□□□ -0.13
MSH6-208ENST00000493177 FMNL3Q8IVF7 1028 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 UBALD2Q8IYN6 164 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 UBR7Q8N806 425 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 OR8K1Q8NGG5 319 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 KBTBD7Q8WVZ9 684 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 NT5C1AQ9BXI3 368 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 GPR88Q9GZN0 384 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 CYP4F11Q9HBI6 524 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 ABHD10Q9NUJ1 306 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 DDX43Q9NXZ2 648 aaKnown RBP14.27□□□□□ -0.13
MSH6-208ENST00000493177 HMGXB4Q9UGU5 601 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 CYP26A1O43174 497 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 CYP11A1P05108 521 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 CD19P15391 556 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 FSHRP23945 695 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 ACAT1P24752 427 aaKnown RBP14.26□□□□□ -0.13
MSH6-208ENST00000493177 INCA1Q0VD86 236 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 LIMS2Q7Z4I7 341 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 UNC93AQ86WB7 457 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 FAM71AQ8IYT1 594 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 ELMOD1Q8N336 334 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 SPATA18Q8TC71 538 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 ZNF707Q96C28 371 aaPredicted RBP14.26□□□□□ -0.13
MSH6-208ENST00000493177 PDLIM2Q96JY6 352 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 TWNKQ96RR1 684 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 RHOBTB2Q9BYZ6 727 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 ELOVL4Q9GZR5 314 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 MFSD1Q9H3U5 465 aa14.26□□□□□ -0.13
MSH6-208ENST00000493177 FAM124BQ9H5Z6 455 aaPredicted RBP14.26□□□□□ -0.13
MSH6-208ENST00000493177 DOCK6Q96HP0 2047 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 TSC2P49815 1807 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 WDR27A2RRH5 827 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 HCRTO43612 131 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 LMO2P25791 158 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 PCSK1P29120 753 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 GNA15P30679 374 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 HOXA9P31269 272 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 PDE6CP51160 858 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 BPIFB4P59827 614 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 PTK2Q05397 1052 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 ARID5BQ14865 1188 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 TDRD12Q587J7 1177 aaKnown RBP14.25□□□□□ -0.13
MSH6-208ENST00000493177 RSPO2Q6UXX9 243 aaPredicted RBP14.25□□□□□ -0.13
MSH6-208ENST00000493177 HFE2Q6ZVN8 426 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 ACOT1Q86TX2 421 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 TC2NQ8N9U0 490 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 ZNF461Q8TAF7 563 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 WHAMMQ8TF30 809 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 TMEM176AQ96HP8 235 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 TNIP3Q96KP6 325 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 HEXIM2Q96MH2 286 aaKnown RBP14.25□□□□□ -0.13
MSH6-208ENST00000493177 SYT15Q9BQS2 421 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.25□□□□□ -0.133e-10■■■■■ 28.1
MSH6-208ENST00000493177 FBXL21Q9UKT6 434 aa14.25□□□□□ -0.13
MSH6-208ENST00000493177 GABRDO14764 452 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 THAP12O43422 761 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 CALCAP01258 141 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 SKILP12757 684 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 CLCN1P35523 988 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 RAD23BP54727 409 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 PSMC1P62191 440 aaKnown RBP14.24□□□□□ -0.13
MSH6-208ENST00000493177 NTHL1P78549 312 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 TSPY1Q01534 308 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 ADCY1Q08828 1119 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 KLHL30Q0D2K2 578 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 PABPC1LQ4VXU2 614 aaKnown RBP14.24□□□□□ -0.13
MSH6-208ENST00000493177 SLC8B1Q6J4K2 584 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 RTL10Q7L3V2 364 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 SLC47A2Q86VL8 602 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 SLC4A11Q8NBS3 891 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 SYN2Q92777 582 aaPredicted RBP14.24□□□□□ -0.13
MSH6-208ENST00000493177 DNAJC7Q99615 494 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 OXCT2Q9BYC2 517 aaPredicted RBP14.24□□□□□ -0.13
MSH6-208ENST00000493177 PDCL3Q9H2J4 239 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 DPEP3Q9H4B8 488 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 AIPL1Q9NZN9 384 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 IGSF9Q9P2J2 1179 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 CDH9Q9ULB4 789 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 CNTN6Q9UQ52 1028 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 NME7Q9Y5B8 376 aa14.24□□□□□ -0.13
MSH6-208ENST00000493177 DOCK8Q8NF50 2099 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 OAZ2O95190 189 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 SERPING1P05155 500 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 PAEPP09466 180 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 VDRP11473 427 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 ATF2P15336 505 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 BRD2P25440 801 aaKnown RBP14.23□□□□□ -0.13
MSH6-208ENST00000493177 ZNF132P52740 706 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 TDGQ13569 410 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms