RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TSPY1Q01534 308 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 BST2Q10589 180 aaKnown RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 INTS6LQ5JSJ4 861 aaKnown RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 SPOUT1Q5T280 376 aaKnown RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 FAM171A1Q5VUB5 890 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 FUT10Q6P4F1 479 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 FUKQ8N0W3 1084 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 MYCBPAPQ8TBZ2 947 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 ZNF564Q8TBZ8 553 aaPredicted RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 C18orf8Q96DM3 657 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 CPXM1Q96SM3 734 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 YME1L1Q96TA2 773 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 NAPGQ99747 312 aaPredicted RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 GPR62Q9BZJ7 368 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 SYNCQ9H7C4 482 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 MRPL47Q9HD33 250 aaKnown RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 ST7Q9NRC1 585 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 CHORDC1Q9UHD1 332 aaPredicted RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 COG5Q9UP83 839 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 JRKLQ9Y4A0 524 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 SCINQ9Y6U3 715 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 MYBPHLA2RUH7 354 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 GRID2IPA4D2P6 1211 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 CARNS1A5YM72 827 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 BMP8BP34820 402 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 SLC8A3P57103 927 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 PLCB3Q01970 1234 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 PDE4CQ08493 712 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 MAPRE1Q15691 268 aaKnown RBP14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 CCDC142Q17RM4 750 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 TEX35Q5T0J7 233 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 PLEKHA7Q6IQ23 1121 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 TMEM173Q86WV6 379 aaPredicted RBP14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 SYCE1Q8N0S2 351 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 LRRC57Q8N9N7 239 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 IPO4Q8TEX9 1081 aaKnown RBP14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 SLC35F5Q8WV83 523 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 PCED1BQ96HM7 432 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 MED10Q9BTT4 135 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 MIS12Q9H081 205 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 PARVAQ9NVD7 372 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 CDC23Q9UJX2 597 aa14.87□□□□□ -0.03
PDZRN3-210ENST00000492909 FGFR3P22607 806 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 GABRB2P47870 512 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 SNX16P57768 344 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 VARS2Q5ST30 1063 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 CYP4A22Q5TCH4 519 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 PMF1Q6P1K2 205 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 FAM171BQ6P995 826 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 KCNT2Q6UVM3 1135 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 PHLDB2Q86SQ0 1253 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 DAAM2Q86T65 1068 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 CEP57Q86XR8 500 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 CEP112Q8N8E3 955 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 OR10T2Q8NGX3 314 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 STK32AQ8WU08 396 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 HERVK_113Q902F9 699 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 DUSP16Q9BY84 665 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 B3GNT5Q9BYG0 378 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 WDR35Q9P2L0 1181 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 KIAA1671Q9BY89 1806 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 PTPRDP23468 1912 aa14.86□□□□□ -0.03
PDZRN3-210ENST00000492909 CLDN5O00501 218 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 ENC1O14682 589 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 BUB1BO60566 1050 aaPredicted RBP14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 GJB5O95377 273 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 ERBB2P04626 1255 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 FAM200BP0CF97 657 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 LAG3P18627 525 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 GSCP56915 257 aaPredicted RBP14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 FAM193AP78312 1265 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 MAMLD1Q13495 774 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 FAM109BQ6ICB4 259 aaPredicted RBP14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 LLGL2Q6P1M3 1020 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 PAQR9Q6ZVX9 377 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 SLFN11Q7Z7L1 901 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 TDHQ8IZJ6 230 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 C3orf20Q8ND61 904 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 BCL7CQ8WUZ0 217 aaPredicted RBP14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 IGSF21Q96ID5 467 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 ZNF558Q96NG5 402 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 MRPL42Q9Y6G3 142 aaKnown RBP14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 NLRC5Q86WI3 1866 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 TULP2O00295 520 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 NPR3P17342 541 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 PLA2G4AP47712 749 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 RGS7P49802 495 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 ZNF268Q14587 947 aaPredicted RBP14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 ZNF280DQ6N043 979 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 C11orf63Q6NUN7 778 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 DNAJC24Q6P3W2 148 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 FAM35AQ86V20 835 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 MYLPFQ96A32 169 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 PKMYT1Q99640 499 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 ZBED2Q9BTP6 218 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 SLC4A5Q9BY07 1137 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 CYLDQ9NQC7 956 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 KRT82Q9NSB4 513 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 TJP2Q9UDY2 1190 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms