RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 DNASE1L2Q92874 299 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
MDC1-207ENST00000492462 FUBP3Q96I24 572 aaKnown RBP eCLIP12.59□□□□□ -0.39
MDC1-207ENST00000492462 SHDQ96IW2 340 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 GCNAQ96QF7 691 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 LTB4R2Q9NPC1 389 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 TMEM30AQ9NV96 361 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 MAGEC2Q9UBF1 373 aaPredicted RBP12.59□□□□□ -0.39
MDC1-207ENST00000492462 CCL26Q9Y258 94 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 PATJQ8NI35 1801 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 FAM170BA6NMN3 283 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 CLDN5O00501 218 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 ZNF263O14978 683 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 GADD45BO75293 160 aaPredicted RBP12.58□□□□□ -0.4
MDC1-207ENST00000492462 CLSTN1O94985 981 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 HLA-DRAP01903 254 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 CSH1P0DML2 217 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 CSH2P0DML3 217 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 PTPN1P18031 435 aaKnown RBP12.58□□□□□ -0.4
MDC1-207ENST00000492462 ATICP31939 592 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 PRCPP42785 496 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 MAGEA11P43364 429 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 SOX9P48436 509 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 GCLMP48507 274 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 VAMP7P51809 220 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 AP3M2P53677 418 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 USP46P62068 366 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 FAM160A1Q05DH4 1040 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 PPP3CAQ08209 521 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 FCHO2Q0JRZ9 810 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 FZD5Q13467 585 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 ANGPT1Q15389 498 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 NFIL3Q16649 462 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 ZNF667Q5HYK9 610 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 C4orf50Q6ZRC1 276 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 TTC8Q8TAM2 541 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 RIN3Q8TB24 985 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 IRF7Q92985 503 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 MYRFLQ96LU7 910 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 SLC22A12Q96S37 553 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 ZNF518BQ9C0D4 1074 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 VRTNQ9H8Y1 702 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 FRMD4BQ9Y2L6 1034 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 PCDHA5Q9Y5H7 936 aa12.58□□□□□ -0.4
MDC1-207ENST00000492462 FASNP49327 2511 aaKnown RBP12.58□□□□□ -0.4
MDC1-207ENST00000492462 A8MXQ7 604 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 DPYSL4O14531 572 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 KIF20AO95235 890 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 GRIK1P39086 918 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 NBL1P41271 181 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 PMS1P54277 932 aaKnown RBP12.57□□□□□ -0.4
MDC1-207ENST00000492462 ORC1Q13415 861 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 ADAM9Q13443 819 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 ISM2Q6H9L7 571 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 YAF2Q8IY57 180 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 FAM186BQ8IYM0 893 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 CMTM8Q8IZV2 173 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 ADSSL1Q8N142 457 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 TAS1R2Q8TE23 839 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 USP13Q92995 863 aaPredicted RBP12.57□□□□□ -0.4
MDC1-207ENST00000492462 E2F7Q96AV8 911 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 RMDN1Q96DB5 314 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 TRMT2BQ96GJ1 504 aaKnown RBP12.57□□□□□ -0.4
MDC1-207ENST00000492462 B3GNT5Q9BYG0 378 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 MMRN2Q9H8L6 949 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 TRPV5Q9NQA5 729 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 GTSE1Q9NYZ3 720 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 HMGXB4Q9UGU5 601 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 NDRG2Q9UN36 371 aaKnown RBP12.57□□□□□ -0.4
MDC1-207ENST00000492462 PIAS3Q9Y6X2 628 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 EP300Q09472 2414 aaPredicted RBP12.57□□□□□ -0.4
MDC1-207ENST00000492462 USP24Q9UPU5 2620 aa12.57□□□□□ -0.4
MDC1-207ENST00000492462 MYH10P35580 1976 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 F8VP50 259 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 IKBKBO14920 756 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 MAPK13O15264 365 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 CHADO15335 359 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 ASS1P00966 412 aaKnown RBP12.56□□□□□ -0.4
MDC1-207ENST00000492462 FAM163BP0C2L3 166 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 WEE1P30291 646 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 PSMC2P35998 433 aaKnown RBP12.56□□□□□ -0.4
MDC1-207ENST00000492462 PIK3CAP42336 1068 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 ASPAP45381 313 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 TNK2Q07912 1038 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 MAPRE1Q15691 268 aaKnown RBP12.56□□□□□ -0.4
MDC1-207ENST00000492462 SGSM1Q2NKQ1 1148 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 ZNF658Q5TYW1 1059 aaPredicted RBP12.56□□□□□ -0.4
MDC1-207ENST00000492462 VSTM1Q6UX27 236 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 PAQR9Q6ZVX9 377 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 FRMD5Q7Z6J6 570 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 MON1AQ86VX9 555 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 MAML2Q8IZL2 1156 aaPredicted RBP12.56□□□□□ -0.4
MDC1-207ENST00000492462 B3GALNT2Q8NCR0 500 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 SPATA20Q8TB22 786 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 BPIFB1Q8TDL5 484 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 MRPS31Q92665 395 aaKnown RBP12.56□□□□□ -0.4
MDC1-207ENST00000492462 TIGD1Q96MW7 591 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 CYP2S1Q96SQ9 504 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms